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Report for CCDS11005.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11005.1 Public Homo sapiens 17 INPP5K 24 110 108 CCDS HistoryNCBI Gene:51763Re-query CCDS DB by CCDS ID:11005.1Re-query CCDS DB by GeneID:51763See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11005.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000320345.10 ENSP00000318476.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000320345.10Link to Ensembl Protein Viewer:ENSP00000318476.6Re-query CCDS DB by Nucleotide ID:ENST00000320345Re-query CCDS DB by Protein ID:ENSP00000318476
Original member Current member EBI ENST00000406424.8 ENSP00000385177.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406424.8Link to Ensembl Protein Viewer:ENSP00000385177.4Re-query CCDS DB by Nucleotide ID:ENST00000406424Re-query CCDS DB by Protein ID:ENSP00000385177
Original member Current member NCBI NM_001135642.2 NP_001129114.1 Accepted alive Link to Nucleotide Sequence:NM_001135642.2Link to Protein Sequence:NP_001129114.1Re-query CCDS DB by Nucleotide ID:NM_001135642Re-query CCDS DB by Protein ID:NP_001129114Link to BLAST:NP_001129114.1
Original member Current member NCBI NM_130766.3 NP_570122.1 Accepted alive Link to Nucleotide Sequence:NM_130766.3Link to Protein Sequence:NP_570122.1Re-query CCDS DB by Nucleotide ID:NM_130766Re-query CCDS DB by Protein ID:NP_570122Link to BLAST:NP_570122.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129114.1 372 Q9BT40-2 372 100% 0 0
NP_570122.1 372 Q9BT40-2 372 100% 0 0

Chromosomal Locations for CCDS 11005.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 1495823 1495879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1496060 1496164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1496319 1496402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1496666 1496803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1497936 1498122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1506980 1507089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1508115 1508226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1509178 1509353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1509683 1509799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 1513453 1513485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1119 nt):
ATGGATGTGCTTTCCCCTCTGAGCTTCATCAAGGTCTCCCATGTCCGTATGCAGGGGATCCTCTTACTGG
TCTTTGCCAAGTATCAGCATTTGCCCTATATCCAGATTCTGTCTACTAAATCCACCCCCACTGGCCTGTT
TGGGTACTGGGGGAACAAAGGTGGAGTCAACATCTGCCTGAAGCTTTATGGCTACTATGTCAGCATCATC
AACTGCCACCTGCCTCCCCACATTTCCAACAATTACCAGCGGCTGGAGCACTTTGACCGGATCCTGGAGA
TGCAGAATTGTGAGGGGCGAGACATCCCAAACATCCTGGACCACGACCTCATTATCTGGTTTGGAGACAT
GAACTTTCGGATCGAGGACTTTGGGTTGCACTTTGTTCGGGAATCCATTAAAAATCGGTGCTACGGTGGC
CTGTGGGAGAAGGACCAGCTCAGCATTGCCAAGAAACATGACCCGCTGCTCCGGGAGTTCCAGGAGGGCC
GCCTACTCTTCCCGCCCACCTACAAGTTTGATAGGAACTCCAACGACTATGACACCAGTGAGAAAAAACG
CAAGCCTGCATGGACCGATCGCATCCTGTGGAGGCTGAAGCGGCAGCCCTGTGCTGGCCCCGACACTCCC
ATACCGCCGGCGTCACACTTCTCCTTGTCTCTGAGGGGCTACAGCAGCCACATGACGTACGGCATCAGCG
ACCACAAGCCTGTCTCCGGCACGTTCGACTTGGAGCTGAAGCCATTGGTGTCTGCTCCGCTGATCGTCCT
GATGCCCGAGGACCTGTGGACCGTGGAAAATGACATGATGGTCAGCTACTCTTCAACCTCGGACTTCCCC
AGCAGCCCGTGGGACTGGATTGGACTGTACAAGGTGGGGCTGCGGGACGTTAATGACTACGTGTCCTATG
CCTGGGTCGGGGACAGCAAGGTCTCCTGCAGCGACAACCTGAACCAGGTTTACATCGACATCAGCAATAT
CCCTACCACTGAAGATGAGTTTCTCCTCTGTTACTACAGCAACAGTCTGCGTTCTGTGGTGGGGATAAGC
AGACCCTTCCAGATCCCGCCTGGCTCCTTGAGGGAGGACCCACTGGGTGAAGCACAGCCACAGATCTGA

Translation (372 aa):
MDVLSPLSFIKVSHVRMQGILLLVFAKYQHLPYIQILSTKSTPTGLFGYWGNKGGVNICLKLYGYYVSII
NCHLPPHISNNYQRLEHFDRILEMQNCEGRDIPNILDHDLIIWFGDMNFRIEDFGLHFVRESIKNRCYGG
LWEKDQLSIAKKHDPLLREFQEGRLLFPPTYKFDRNSNDYDTSEKKRKPAWTDRILWRLKRQPCAGPDTP
IPPASHFSLSLRGYSSHMTYGISDHKPVSGTFDLELKPLVSAPLIVLMPEDLWTVENDMMVSYSSTSDFP
SSPWDWIGLYKVGLRDVNDYVSYAWVGDSKVSCSDNLNQVYIDISNIPTTEDEFLLCYYSNSLRSVVGIS
RPFQIPPGSLREDPLGEAQPQI


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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