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Report for CCDS7349.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7349.1 Public Homo sapiens 10 COMTD1 24 110 108 CCDS HistoryNCBI Gene:118881Re-query CCDS DB by CCDS ID:7349.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7349.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372538.8 ENSP00000361616.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372538.8Link to Ensembl Protein Viewer:ENSP00000361616.3Re-query CCDS DB by Nucleotide ID:ENST00000372538Re-query CCDS DB by Protein ID:ENSP00000361616
Original member Current member NCBI NM_144589.4 NP_653190.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_144589.4Link to Protein Sequence:NP_653190.2Re-query CCDS DB by Nucleotide ID:NM_144589Re-query CCDS DB by Protein ID:NP_653190Link to BLAST:NP_653190.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_653190.2 262 Q86VU5 262 100% 0 0

Chromosomal Locations for CCDS 7349.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75234073 75234225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75234610 75234743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75234938 75234992 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75235060 75235178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75235267 75235372 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75235616 75235743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 75235835 75235928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGACCCAGCCGGTGCCCCGGCTCTCCGTGCCCGCCGCGCTGGCCCTGGGCTCAGCCGCACTGGGCGCCG
CCTTCGCCACTGGCCTCTTCCTGGGGAGGCGGTGCCCCCCATGGCGAGGCCGGCGAGAGCAGTGCCTGCT
TCCCCCCGAGGACAGCCGCCTGTGGCAGTATCTTCTGAGCCGCTCCATGCGGGAGCACCCGGCGCTGCGA
AGCCTGAGGCTGCTGACCCTGGAGCAGCCGCAGGGGGATTCTATGATGACCTGCGAGCAGGCCCAGCTCT
TGGCCAACCTGGCGCGGCTCATCCAGGCCAAGAAGGCGCTGGACCTGGGCACCTTCACGGGCTACTCCGC
CCTGGCCCTGGCCCTGGCGCTGCCCGCGGACGGGCGCGTGGTGACCTGCGAGGTGGACGCGCAGCCCCCG
GAGCTGGGACGGCCCCTGTGGAGGCAGGCCGAGGCGGAGCACAAGATCGACCTCCGGCTGAAGCCCGCCT
TGGAGACCCTGGACGAGCTGCTGGCGGCGGGCGAGGCCGGCACCTTCGACGTGGCCGTGGTGGATGCGGA
CAAGGAGAACTGCTCCGCCTACTACGAGCGCTGCCTGCAGCTGCTGCGACCCGGAGGCATCCTCGCCGTC
CTCAGAGTCCTGTGGCGCGGGAAGGTGCTGCAACCTCCGAAAGGGGACGTGGCGGCCGAGTGTGTGCGAA
ACCTAAACGAACGCATCCGGCGGGACGTCAGGGTCTACATCAGCCTCCTGCCCCTGGGCGATGGACTCAC
CTTGGCCTTCAAGATCTAG

Translation (262 aa):
MTQPVPRLSVPAALALGSAALGAAFATGLFLGRRCPPWRGRREQCLLPPEDSRLWQYLLSRSMREHPALR
SLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPP
ELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAV
LRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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