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Report for CCDS14744.2 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
14744.2 |
Public |
Homo sapiens |
X |
TEX28 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:1527](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:14744.2](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome X in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23
Review status: Reviewed (by RefSeq, Havana and CCDS collaboration) Sequence IDs included in CCDS 14744.2
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
---|
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000619903.4 |
ENSP00000478834.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000619903.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000478834.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000619903](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000478834](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000610938.1 |
ENSP00000479148.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000610938.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000479148.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000610938](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000479148](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000617225.5 |
ENSP00000482010.1 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000617225.5](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000482010.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000617225](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000482010](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001205201.2 |
NP_001192130.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001205201.2](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001192130.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001205201](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001192130](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001192130.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001586.3 |
NP_001577.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001586.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001577.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001586](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001577](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001577.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 14744.2
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
---|
Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1233 nt): ATGGTTTTAAAGGCGGAACACACCAGGAGCCCCAGCGCAACCCTCCCCTCCAATGTGCCTTCATGCCGGT CCCTGTCATCCAGCGAAGACGGCCCCAGTGGCCCTTCCAGCCTCGCAGATGGAGGCCTAGCCCACAACTT ACAGGATAGTGTCAGGCACCGCATCCTCTACCTCTCAGAGCAGCTGAGAGTGGAGAAGGCCAGTCGGGAT GGCAACACTGTGAGCTACCTCAAGCTGGTATCCAAAGCAGACCGGCACCAGGTGCCGCACATCCAGCAGG CCTTTGAGAAGGTGAACCAGCGCGCCTCTGCCACCATCGCCCAGATCGAGCACAGGCTCCACCAGTGTCA CCAGCAGCTCCAGGAGCTGGAGGAAGGCTGCAGGCCCGAGGGCTTACTGCTGATGGCAGAAAGCGACCCA GCCAACTGCGAGCCACCCAGTGAGAAGGCCCTGCTTTCAGAGCCCCCCGAGCCAGGTGGGGAAGACGGGC CGGTCAACCTGCCTCATGCCAGCAGGCCCTTCATCTTGGAGAGTCGCTTCCAGAGCTTACAGCAGGGGAC GTGCTTAGAGACAGAGGATGTGGCCCAGCAACAAAACCTGCTGTTGCAGAAGGTAAAGGCAGAGCTGGAA GAAGCCAAGAGGTTCCACATCAGCCTCCAGGAGTCCTATCACAGCCTAAAGGAGAGGTCTCTGACTGACC TGCAGCTGTTGCTGGAGTCCCTTCAGGAGGAGAAGTGTAGGCAAGCATTGATGGAAGAACAGGTGAATGG TCGCCTGCAGGGACAGCTGAATGAGATTTACAACCTCAAACACAATCTGGCCTGCAGCGAAGAGAGAATG GCCTATCTATCCTATGAGAGAGCCAAGGAAATATGGGAGATCACGGAGACCTTCAAGAGCCGAATATCCA AGCTGGAGATGCTACAGCAAGTCACCCAACTGGAGGCAGCGGAGCACCTCCAAAGCCGTCCCCCGCAGAT GTTGTTCAAGTTCCTGAGTCCGCGCCTCTCACTGGCAACCGTCCTCTTGGTCTTTGTCTCCACCTTGTGT GCCTGCCCCTCGTCACTGATCAGCTCACGCCTGTGCACCTGCACCATGCTGATGCTGATCGGGCTTGGGG TCCTGGCCTGGCAGAGGTGGCGCGCCATCCCTGCCACAGACTGGCAGGAATGGGTCCCCTCCAGGTGTAG ACTGTACTCCAAGGACTCTGGGCCTCCAGCAGATGGACCTTAA
Translation (410 aa): MVLKAEHTRSPSATLPSNVPSCRSLSSSEDGPSGPSSLADGGLAHNLQDSVRHRILYLSEQLRVEKASRD GNTVSYLKLVSKADRHQVPHIQQAFEKVNQRASATIAQIEHRLHQCHQQLQELEEGCRPEGLLLMAESDP ANCEPPSEKALLSEPPEPGGEDGPVNLPHASRPFILESRFQSLQQGTCLETEDVAQQQNLLLQKVKAELE EAKRFHISLQESYHSLKERSLTDLQLLLESLQEEKCRQALMEEQVNGRLQGQLNEIYNLKHNLACSEERM AYLSYERAKEIWEITETFKSRISKLEMLQQVTQLEAAEHLQSRPPQMLFKFLSPRLSLATVLLVFVSTLC ACPSSLISSRLCTCTMLMLIGLGVLAWQRWRAIPATDWQEWVPSRCRLYSKDSGPPADGP
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