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Report for CCDS35321.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35321.1 Public Homo sapiens X AWAT1 24 110 108 CCDS HistoryNCBI Gene:158833Re-query CCDS DB by CCDS ID:35321.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35321.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000374521.4 ENSP00000363645.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000374521.4Link to Ensembl Protein Viewer:ENSP00000363645.3Re-query CCDS DB by Nucleotide ID:ENST00000374521Re-query CCDS DB by Protein ID:ENSP00000363645
Original member Current member NCBI NM_001013579.3 NP_001013597.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013579.3Link to Protein Sequence:NP_001013597.1Re-query CCDS DB by Nucleotide ID:NM_001013579Re-query CCDS DB by Protein ID:NP_001013597Link to BLAST:NP_001013597.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013597.1 328 Q58HT5 328 100% 0 0

Chromosomal Locations for CCDS 35321.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 70234696 70234771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70235716 70235823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70236069 70236139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70237044 70237248 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70238212 70238383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70239735 70239934 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 70240136 70240290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (987 nt):
ATGGCTCATTCCAAGCAGCCTAGTCACTTCCAGAGTCTGATGCTTCTGCAGTGGCCTTTGAGCTACCTTG
CCATCTTTTGGATCTTGCAGCCATTGTTCGTCTACCTGCTGTTTACATCCTTGTGGCCGCTACCAGTGCT
TTACTTTGCCTGGTTGTTCCTGGACTGGAAGACCCCAGAGCGAGGTGGCAGGCGTTCGGCCTGGGTAAGG
AACTGGTGTGTCTGGACCCACATCAGGGACTATTTCCCCATTACGATCCTGAAGACAAAGGACCTATCAC
CTGAGCACAACTACCTCATGGGGGTTCACCCCCATGGCCTCCTGACCTTTGGCGCCTTCTGCAACTTCTG
CACTGAGGCCACAGGCTTCTCGAAGACCTTCCCAGGCATCACTCCTCACTTGGCCACGCTGTCCTGGTTC
TTCAAGATCCCCTTTGTTAGGGAGTACCTCATGGCCAAAGGTGTGTGCTCTGTGAGCCAGCCAGCCATCA
ACTATCTGCTGAGCCATGGCACTGGCAACCTCGTGGGCATTGTAGTGGGAGGTGTGGGTGAGGCCCTGCA
AAGTGTGCCCAACACCACCACCCTCATCCTCCAGAAGCGCAAGGGGTTCGTGCGCACAGCCCTCCAGCAT
GGGGCTCATCTGGTCCCCACCTTCACTTTTGGGGAAACTGAGGTGTATGATCAGGTGCTGTTCCATAAGG
ATAGCAGGATGTACAAGTTCCAGAGCTGCTTCCGCCGTATCTTTGGTTTCTACTGTTGTGTCTTCTATGG
ACAAAGCTTCTGTCAAGGCTCCACTGGGCTCCTGCCATACTCCAGGCCTATTGTCACTGTGGTTGGGGAG
CCTCTGCCACTGCCCCAAATTGAAAAGCCAAGCCAGGAGATGGTGGACAAATACCATGCACTTTATATGG
ATGCTCTGCACAAACTGTTCGACCAGCATAAGACCCACTATGGCTGCTCAGAGACCCAAAAGCTGTTTTT
CCTGTGA

Translation (328 aa):
MAHSKQPSHFQSLMLLQWPLSYLAIFWILQPLFVYLLFTSLWPLPVLYFAWLFLDWKTPERGGRRSAWVR
NWCVWTHIRDYFPITILKTKDLSPEHNYLMGVHPHGLLTFGAFCNFCTEATGFSKTFPGITPHLATLSWF
FKIPFVREYLMAKGVCSVSQPAINYLLSHGTGNLVGIVVGGVGEALQSVPNTTTLILQKRKGFVRTALQH
GAHLVPTFTFGETEVYDQVLFHKDSRMYKFQSCFRRIFGFYCCVFYGQSFCQGSTGLLPYSRPIVTVVGE
PLPLPQIEKPSQEMVDKYHALYMDALHKLFDQHKTHYGCSETQKLFFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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