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Report for CCDS31645.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31645.1 Public Homo sapiens 11 KCTD21 24 110 108 CCDS HistoryNCBI Gene:283219Re-query CCDS DB by CCDS ID:31645.1See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31645.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000340067.4 ENSP00000339340.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000340067.4Link to Ensembl Protein Viewer:ENSP00000339340.3Re-query CCDS DB by Nucleotide ID:ENST00000340067Re-query CCDS DB by Protein ID:ENSP00000339340
Original member Current member NCBI NM_001029859.3 NP_001025030.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001029859.3Link to Protein Sequence:NP_001025030.1Re-query CCDS DB by Nucleotide ID:NM_001029859Re-query CCDS DB by Protein ID:NP_001025030Link to BLAST:NP_001025030.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025030.1 260 Q4G0X4 260 100% 0 0

Chromosomal Locations for CCDS 31645.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 78173772 78174554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGTCCGACCCCATCACGCTGAACGTCGGGGGGAAGCTCTATACAACCTCACTGGCGACCCTGACCAGCT
TCCCTGACTCCATGCTAGGCGCCATGTTCAGCGGGAAGATGCCCACCAAGAGGGACAGCCAGGGCAACTG
CTTCATTGACCGTGACGGCAAAGTGTTCCGCTATATCCTCAACTTCCTGCGGACCTCCCACCTTGACCTG
CCTGAGGACTTCCAGGAGATGGGGCTGCTCCGCAGGGAGGCCGACTTCTACCAGGTGCAGCCCCTGATTG
AGGCCCTGCAGGAGAAGGAAGTGGAGCTCTCCAAGGCCGAGAAGAATGCCATGCTCAACATCACACTGAA
CCAGCGTGTGCAGACGGTCCACTTCACTGTGCGCGAGGCACCCCAGATCTACAGCCTCTCCTCTTCCAGC
ATGGAGGTCTTCAACGCCAACATCTTCAGCACCTCCTGCCTCTTCCTCAAGCTCCTTGGCTCTAAGCTCT
TCTACTGCTCCAATGGCAATCTCTCCTCCATCACCAGCCACTTGCAGGACCCCAACCACCTGACTCTGGA
CTGGGTGGCCAATGTGGAGGGCCTGCCAGAGGAGGAGTACACCAAGCAGAACCTCAAGAGGCTCTGGGTG
GTGCCCGCCAACAAGCAGATCAACAGCTTCCAGGTCTTCGTGGAAGAGGTACTGAAAATCGCTCTGAGCG
ATGGCTTCTGCATCGATTCTTCTCACCCACATGCTCTGGATTTTATGAACAATAAGATTATTCGATTAAT
ACGGTACAGGTAA

Translation (260 aa):
MSDPITLNVGGKLYTTSLATLTSFPDSMLGAMFSGKMPTKRDSQGNCFIDRDGKVFRYILNFLRTSHLDL
PEDFQEMGLLRREADFYQVQPLIEALQEKEVELSKAEKNAMLNITLNQRVQTVHFTVREAPQIYSLSSSS
MEVFNANIFSTSCLFLKLLGSKLFYCSNGNLSSITSHLQDPNHLTLDWVANVEGLPEEEYTKQNLKRLWV
VPANKQINSFQVFVEEVLKIALSDGFCIDSSHPHALDFMNNKIIRLIRYR


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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