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Report for CCDS34445.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34445.1 Public Homo sapiens 6 OARD1 24 110 108 CCDS HistoryNCBI Gene:221443Re-query CCDS DB by CCDS ID:34445.1Re-query CCDS DB by GeneID:221443See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34445.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424266.7 ENSP00000416829.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000424266.7Link to Ensembl Protein Viewer:ENSP00000416829.2Re-query CCDS DB by Nucleotide ID:ENST00000424266Re-query CCDS DB by Protein ID:ENSP00000416829
Original member Current member EBI ENST00000463088.5 ENSP00000420193.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000463088.5Link to Ensembl Protein Viewer:ENSP00000420193.1Re-query CCDS DB by Nucleotide ID:ENST00000463088Re-query CCDS DB by Protein ID:ENSP00000420193
Original member Current member EBI ENST00000479950.5 ENSP00000420484.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000479950.5Link to Ensembl Protein Viewer:ENSP00000420484.1Re-query CCDS DB by Nucleotide ID:ENST00000479950Re-query CCDS DB by Protein ID:ENSP00000420484
Original member Current member EBI ENST00000468811.5 ENSP00000420601.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000468811.5Link to Ensembl Protein Viewer:ENSP00000420601.1Re-query CCDS DB by Nucleotide ID:ENST00000468811Re-query CCDS DB by Protein ID:ENSP00000420601
Original member Current member NCBI NM_001329684.2 NP_001316613.1 Accepted alive Link to Nucleotide Sequence:NM_001329684.2Link to Protein Sequence:NP_001316613.1Re-query CCDS DB by Nucleotide ID:NM_001329684Re-query CCDS DB by Protein ID:NP_001316613Link to BLAST:NP_001316613.1
Original member Current member NCBI NM_001329685.1 NP_001316614.1 Accepted alive Link to Nucleotide Sequence:NM_001329685.1Link to Protein Sequence:NP_001316614.1Re-query CCDS DB by Nucleotide ID:NM_001329685Re-query CCDS DB by Protein ID:NP_001316614Link to BLAST:NP_001316614.1
Original member Current member NCBI NM_001329686.2 NP_001316615.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001329686.2Link to Protein Sequence:NP_001316615.1Re-query CCDS DB by Nucleotide ID:NM_001329686Re-query CCDS DB by Protein ID:NP_001316615Link to BLAST:NP_001316615.1
Original member Current member NCBI NM_001329688.2 NP_001316617.1 Accepted alive Link to Nucleotide Sequence:NM_001329688.2Link to Protein Sequence:NP_001316617.1Re-query CCDS DB by Nucleotide ID:NM_001329688Re-query CCDS DB by Protein ID:NP_001316617Link to BLAST:NP_001316617.1
Original member Current member NCBI NM_145063.4 NP_659500.1 Accepted alive Link to Nucleotide Sequence:NM_145063.4Link to Protein Sequence:NP_659500.1Re-query CCDS DB by Nucleotide ID:NM_145063Re-query CCDS DB by Protein ID:NP_659500Link to BLAST:NP_659500.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316613.1 152 Q9Y530 152 100% 0 0
NP_001316614.1 152 Q9Y530 152 100% 0 0
NP_001316615.1 152 Q9Y530 152 100% 0 0
NP_001316617.1 152 Q9Y530 152 100% 0 0
NP_659500.1 152 Q9Y530 152 100% 0 0

Chromosomal Locations for CCDS 34445.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 41067335 41067437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41068841 41068953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41070076 41070134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41071132 41071276 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 41071596 41071634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (459 nt):
ATGGCCAGCAGCCTTAATGAAGATCCAGAAGGAAGCAGAATCACTTATGTGAAAGGAGACCTTTTTGCAT
GCCCGAAAACAGACTCTTTAGCCCACTGTATCAGTGAGGATTGTCGCATGGGCGCTGGGATAGCTGTCCT
CTTTAAGAAGAAATTTGGAGGGGTGCAAGAACTTTTAAATCAACAAAAGAAATCTGGAGAAGTGGCTGTT
CTGAAGAGAGATGGGCGATATATATATTACTTGATTACAAAGAAAAGGGCTTCGCACAAGCCAACTTATG
AAAACTTACAGAAGAGTTTAGAGGCAATGAAGTCTCATTGTCTGAAGAATGGAGTCACTGACCTCTCCAT
GCCCAGGATTGGATGTGGTCTTGATCGTCTGCAATGGGAAAATGTATCTGCGATGATCGAGGAGGTATTT
GAGGCAACAGACATCAAAATTACTGTGTACACACTCTGA

Translation (152 aa):
MASSLNEDPEGSRITYVKGDLFACPKTDSLAHCISEDCRMGAGIAVLFKKKFGGVQELLNQQKKSGEVAV
LKRDGRYIYYLITKKRASHKPTYENLQKSLEAMKSHCLKNGVTDLSMPRIGCGLDRLQWENVSAMIEEVF
EATDIKITVYTL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
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