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Report for CCDS30658.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30658.1 Public Homo sapiens 1 TMEM200B 24 110 108 CCDS HistoryNCBI Gene:399474Re-query CCDS DB by CCDS ID:30658.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30658.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000521452.2 ENSP00000428459.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000521452.2Link to Ensembl Protein Viewer:ENSP00000428459.1Re-query CCDS DB by Nucleotide ID:ENST00000521452Re-query CCDS DB by Protein ID:ENSP00000428459
Original member Current member EBI ENST00000420504.2 ENSP00000428544.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420504.2Link to Ensembl Protein Viewer:ENSP00000428544.1Re-query CCDS DB by Nucleotide ID:ENST00000420504Re-query CCDS DB by Protein ID:ENSP00000428544
Original member Current member NCBI NM_001003682.4 NP_001003682.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001003682.4Link to Protein Sequence:NP_001003682.1Re-query CCDS DB by Nucleotide ID:NM_001003682Re-query CCDS DB by Protein ID:NP_001003682Link to BLAST:NP_001003682.1
Original member Current member NCBI NM_001171868.2 NP_001165339.1 Accepted alive Link to Nucleotide Sequence:NM_001171868.2Link to Protein Sequence:NP_001165339.1Re-query CCDS DB by Nucleotide ID:NM_001171868Re-query CCDS DB by Protein ID:NP_001165339Link to BLAST:NP_001165339.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003682.1 307 Q69YZ2 307 100% 0 0
NP_001165339.1 307 Q69YZ2 307 100% 0 0

Chromosomal Locations for CCDS 30658.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 29120905 29121828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (924 nt):
ATGACGGCCGGGAGCCCCGAAGAATGCGGGGAGGTGCGGAGGAGCCCCGAGGGCCGCGTCTCTCGCTTGG
GCCGCCGCCTGGGCCGCCGCCGGCGCCCGCGCTCCCCGCCCGAGCCTCTGCGGGTGCGGGCGCGGCTGCG
GCTGCGCTCGCCGTCGGGGGCGTTCGCGGCGCTGGGGGCGCTCGTGGTACTGGTGGGTATGGGCATTGCA
GTGGCCGGCTACTGGCCGCACCGGGCCGGGGCCCCAGGGTCCCGGGCCGCCAATGCCAGCTCGCCCCAGA
TGAGCGAGCTGCGACGCGAGGGTCGCGGCGGGGGCCGGGCTCACGGCCCGCACGAGCGGCTGCGGCTCCT
CGGGCCGGTGATCATGGGCGTCGGCCTGTTCGTGTTCATCTGCGCCAACACACTGCTGTATGAGAACCGA
GACTTGGAGACGCGACGGCTCCGCCAGGGGGTGCTGCGGGCCCAGGCGCTCCGGCCCCCCGACGGCCCGG
GCTGGGACTGCGCCCTCCTTCCCAGCCCCGGCCCTAGGAGTCCCCGAGCCGTAGGCTGCGCAGAGCCAGA
AATCTGGGACCCGTCCCCGCGTCGGGGTACTTCACCCGTCCCGTCAGTGCGGAGTCTGCGTTCAGAGCCC
GCTAATCCTCGCTTGGGGTTACCTGCCTTGCTCAACAGCTACCCGCTGAAGGGCCCCGGGCTGCCCCCAC
CCTGGGGTCCACGGACGCAGACTGGCCATGTGATCATCACCGTGCAGCCGTCTGGCTCCTGCATTGAACA
TTCCAAGTCTCTGGATCTGGGCCTTGGGGAGCTCCTCCTTGGGGCCCCAGCAGCTCGGGACTGTGCTCAC
CGAAGCTGGCCACGGCTGGACCGCCTCAGTCTTGGGGGCTATGCCAAATTGGGAGGAGGAGGGGACTTGG
GGGCCCGGGTCTGA

Translation (307 aa):
MTAGSPEECGEVRRSPEGRVSRLGRRLGRRRRPRSPPEPLRVRARLRLRSPSGAFAALGALVVLVGMGIA
VAGYWPHRAGAPGSRAANASSPQMSELRREGRGGGRAHGPHERLRLLGPVIMGVGLFVFICANTLLYENR
DLETRRLRQGVLRAQALRPPDGPGWDCALLPSPGPRSPRAVGCAEPEIWDPSPRRGTSPVPSVRSLRSEP
ANPRLGLPALLNSYPLKGPGLPPPWGPRTQTGHVIITVQPSGSCIEHSKSLDLGLGELLLGAPAARDCAH
RSWPRLDRLSLGGYAKLGGGGDLGARV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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