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Report for CCDS44499.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44499.1 Public Homo sapiens 10 FUOM 24 110 108 CCDS HistoryNCBI Gene:282969Re-query CCDS DB by CCDS ID:44499.1Re-query CCDS DB by GeneID:282969See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44499.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000278025.9 ENSP00000278025.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000278025.9Link to Ensembl Protein Viewer:ENSP00000278025.5Re-query CCDS DB by Nucleotide ID:ENST00000278025Re-query CCDS DB by Protein ID:ENSP00000278025
Original member Current member NCBI NM_001098483.3 NP_001091953.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098483.3Link to Protein Sequence:NP_001091953.1Re-query CCDS DB by Nucleotide ID:NM_001098483Re-query CCDS DB by Protein ID:NP_001091953Link to BLAST:NP_001091953.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001091953.1 154 A2VDF0-1 154 100% 0 0

Chromosomal Locations for CCDS 44499.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 133355370 133355436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133355738 133355811 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133356640 133356738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133356943 133357013 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133357187 133357255 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 133357923 133358007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGTGGCGCTGAAGGGTGTCCCCGCACTGCTGTCCCCCGAGCTGCTCTACGCGCTGGCGCGGATGGGGC
ACGGGGACGAGATCGTTCTTGCGGACTTGAACTTCCCGGCCTCCTCCATCTGCCAGTGTGGGCCCATGGA
GATCCGTGCAGACGGCCTGGGCATCCCGCAGCTCCTGGAGGCCGTGCTGAAGCTGCTGCCCCTGGACACC
TATGTGGAGAGTCCGGCTGCAGTCATGGAGCTGGTGCCCAGCGACAAGGAGAGGGGCCTGCAGACCCCAG
TGTGGACGGAGTACGAGTCCATCCTACGCAGGGCCGGCTGTGTGAGAGCCCTGGCAAAGATAGAGAGGTT
TGAGTTTTATGAACGGGCTAAGAAGGCTTTTGCTGTTGTGGCAACGGGGGAGACGGCCCTCTACGGAAAC
CTCATCCTCAGGAAGGGGGTGCTTGCCCTCAACCCCCTGCTGTAG

Translation (154 aa):
MVALKGVPALLSPELLYALARMGHGDEIVLADLNFPASSICQCGPMEIRADGLGIPQLLEAVLKLLPLDT
YVESPAAVMELVPSDKERGLQTPVWTEYESILRRAGCVRALAKIERFEFYERAKKAFAVVATGETALYGN
LILRKGVLALNPLL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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