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Report for CCDS58395.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58395.1 Public Homo sapiens 15 ZFAND6 24 110 108 CCDS HistoryNCBI Gene:54469Re-query CCDS DB by CCDS ID:58395.1Re-query CCDS DB by GeneID:54469See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58395.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000559157.5 ENSP00000454152.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559157.5Link to Ensembl Protein Viewer:ENSP00000454152.1Re-query CCDS DB by Nucleotide ID:ENST00000559157Re-query CCDS DB by Protein ID:ENSP00000454152
Original member Current member NCBI NM_001242917.2 NP_001229846.1 Accepted alive Link to Nucleotide Sequence:NM_001242917.2Link to Protein Sequence:NP_001229846.1Re-query CCDS DB by Nucleotide ID:NM_001242917Re-query CCDS DB by Protein ID:NP_001229846Link to BLAST:NP_001229846.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229846.1 196 Q6FIF0-2 196 100% 0 0

Chromosomal Locations for CCDS 58395.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 80120345 80120498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80121748 80121820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80122700 80122800 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80131180 80131293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 80137480 80137628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (591 nt):
ATGGCTCAAGAAACTAATCACAGCCAAGTGCCTATGCTTTGTTCCACTGGCTGTGGATTTTATGGAAACC
CTCGTACAAATGGCATGTGTTCAGTATGCTATAAAGAACATCTTCAAAGACAGAATAGTAGTAATGGTAG
AATAAGCCCACCTGTTCAATGCACAGATGGCAGTGTGCCAGAAGCCCAGTCAGCATTAGACTCTACATCT
TCATCTATGCAGCCCAGCCCTGTATCAAATCAGTCACTTTTATCAGAATCTGTAGCATCTTCTCAATTGG
ACAGTACATCTGTGGACAAAGCAGTACCTGAAACAGAAGATGTGCAGGCTTCAGTATCAGACACAGCACA
GCAGCCATCTGAAGAGCAAAGCAAGTCTCTTGAAAAACCGAAACAAAAAAAGAATCGCTGTTTCATGTGC
AGGAAGAAAGTGGGACTTACTGGGTTTGAATGCCGGTGTGGAAATGTTTACTGTGGTGTACACCGTTACT
CAGATGTACACAATTGCTCTTACAATTACAAAGCCGATGCTGCTGAGAAAATCAGAAAAGAAAATCCAGT
AGTTGTTGGTGAAAAGATCCAAAAGATTTGA

Translation (196 aa):
MAQETNHSQVPMLCSTGCGFYGNPRTNGMCSVCYKEHLQRQNSSNGRISPPVQCTDGSVPEAQSALDSTS
SSMQPSPVSNQSLLSESVASSQLDSTSVDKAVPETEDVQASVSDTAQQPSEEQSKSLEKPKQKKNRCFMC
RKKVGLTGFECRCGNVYCGVHRYSDVHNCSYNYKADAAEKIRKENPVVVGEKIQKI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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