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Report for CCDS90912.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90912.1 Public Homo sapiens 1 PHC2 24 110 108 CCDS HistoryNCBI Gene:1912Re-query CCDS DB by CCDS ID:90912.1Re-query CCDS DB by GeneID:1912See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90912.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000706360.1 ENSP00000516348.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000706360.1Link to Ensembl Protein Viewer:ENSP00000516348.1Re-query CCDS DB by Nucleotide ID:ENST00000706360Re-query CCDS DB by Protein ID:ENSP00000516348
Original member Current member NCBI NM_001385112.1 NP_001372041.1 Accepted alive Link to Nucleotide Sequence:NM_001385112.1Link to Protein Sequence:NP_001372041.1Re-query CCDS DB by Nucleotide ID:NM_001385112Re-query CCDS DB by Protein ID:NP_001372041Link to BLAST:NP_001372041.1

Chromosomal Locations for CCDS 90912.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 33324865 33325019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33328870 33329146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33330071 33330212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33331348 33331462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33332275 33332404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33334090 33334292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33354401 33354566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33354838 33355253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33367116 33367428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33368536 33368688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33370421 33370585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33371017 33371094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33372289 33372447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 33375366 33375539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2646 nt):
ATGGAGAATGAGCTGCCAGTCCCACATACATCTAGCAGTGCCTGTGCCACCAGCAGTACCAGCGGGGCCA
GTAGCAGCAGTGGCTGCAACAACAGCAGCAGTGGTGGAAGTGGCCGCCCCACCGGGCCCCAGATTTCTGT
GTACAGTGGTATTCCAGACCGGCAGACCGTGCAGGTGATCCAGCAGGCCCTGCACAGACAGCCCAGCACG
GCCGCTCAGTACCTGCAGCAGATGTACGCCGCCCAGCAGCAGCACCTCATGCTGCAGACCGCGGCGCTCC
AGCAGCAGCACCTCAGCAGCGCCCAGCTCCAGAGCCTGGCAGCCGTACAGCAGGCAAGCCTGGTATCCAA
TAGACAAGGAAGCACTTCAGGCAGCAATGTGTCTGCGCAGGCCCCGGCCCAGTCATCTTCGATCAACCTG
GCAGCCTCCCCAGCAGCAGCCCAGCTCCTCAACCGGGCCCAGAGTGTGAACTCTGCAGCAGCCTCAGGCA
TCGCTCAGCAGGCTGTGCTCTTGGGCAACACGTCTTCCCCAGCCCTGACTGCAAGCCAAGCACAGATGTA
TCTGAGGGCACAGATGGCCCAGCCAGGTAACCTGGTGCAGGTAGCTAGGAGCCTAGGCGGCACTGTTCCT
TTGTCCCCTCAGCTCATCTTCACGCCCACGGCCACCGTCGCTACTGTGCAGCCTGAGCTCGGCACTGGCT
CCCCCGCCCGGCCCCCCACCCCCGCCCAGGTACAGAACTTGACCCTCCGAACACAGCAGACACCAGCGGC
AGCAGCCTCGGGCCCCACCCCCACTCAGCCTGTCCTGCCCAGCTTGGCCCTGAAACCCACGCCGGGCGGT
AGCCAGCCTCTGCCTACCCCAGCACAGAGCAGAAATACTGCTCAGGCTTCCCCTGCAGGTGCCAAGCCTG
GCATAGCTGACAGTGTGATGGAGCCACACAAGAAAGGAGATGGCAACAGCAGTGTGCCAGGGAGCATGGA
AGGCCGGGCTGGGCTCAGCCGGACGGTTCCTGCTGTGGCTGCCCACCCCCTCATTGCACCAGCCTATGCT
CAGCTGCAGCCACACCAGCTCCTCCCACAGCCATCCTCAAAGCACCTGCAGCCCCAATTTGTGATCCAGC
AGCAGCCACAGCCACAACAGCAGCAGCCGCCGCCCCAGCAGTCACGGCCTGTGCTCCAAGCTGAGCCCCA
CCCCCAGCTCGCCTCAGTCTCTCCAAGCGTGGCCCTCCAGCCCAGCTCAGAGGCCCATGCCATGCCACTA
GGCCCGGTTACACCCGCCCTGCCACTCCAGTGTCCCACTGCCAACCTGCACAAGCCTGGCGGCAGTCAGC
AGTGTCACCCTCCCACACCTGATACTGGGCCTCAGAATGGACATCCCGAGGGCGTGCCCCACACCCCTCA
ACGCAGGTTCCAGCACACTTCAGCTGTCATCTTACAACTGCAGCCTGCTTCACCAGTGCCCCAGCAGTGT
GTCCCTGATGACTGGAAAGAAGTGGCACCAGGGGAGAAAAGTGTGCCTGAGACGCGGTCTGGCCCATCAC
CACATCAGCAGGCTATTGTCACTGCCATGCCTGGTGGCCTGCCTGTACCCACGAGCCCTAACATCCAGCC
GTCCCCAGCTCACGAGACAGGGCAGGGCATTGTTCATGCACTGACCGACCTCAGCAGCCCCGGCATGACC
TCAGGGAACGGAAACTCTGCCTCCAGCATCGCCGGCACTGCCCCCCAGAATGGTGAGAATAAACCACCAC
AGGCCATTGTGAAACCCCAAATCCTGACGCATGTTATCGAAGGGTTTGTGATCCAGGAGGGGGCGGAGCC
TTTCCCGGTGGGACGCTCGTCCCTGCTGGTGGGGAATCTCAAGAAGAAGTATGCACAGGGGTTCCTGCCT
GAGAAACTTCCACAGCAGGATCACACCACCACCACTGACTCGGAGATGGAGGAGCCCTATCTGCAAGAAT
CCAAAGAGGAGGGTGCTCCCCTCAAACTCAAGTGTGAGCTCTGTGGCCGGGTGGACTTTGCCTATAAGTT
CAAGCGTTCCAAGCGCTTCTGTTCCATGGCTTGTGCAAAGAGGTACAACGTGGGATGCACCAAACGGGTG
GGACTTTTCCACTCAGACCGGAGCAAGCTGCAGAAGGCAGGAGCTGCGACCCACAACCGCCGTCGGGCCA
GCAAAGCCAGTCTGCCACCACTTACCAAGGATACCAAGAAGCAGCCAACAGGCACTGTGCCCCTTTCGGT
TACTGCTGCTTTGCAGCTAACACACAGCCAGGAAGACTCCAGCCGTTGCTCAGATAACTCAAGCTATGAG
GAACCCTTGTCACCCATCTCAGCCAGCTCATCTACTTCCCGCCGGCGACAAGGCCAGCGGGACCTGGAGC
TCCCCGACATGCATATGCGGGACCTGGTGGGCATGGGACACCACTTCCTGCCAAGTGAGCCCACCAAGTG
GAATGTAGAAGACGTCTACGAATTCATCCGCTCTCTGCCAGGCTGCCAGGAGATAGCAGAGGAATTCCGT
GCCCAGGAAATCGACGGGCAAGCCCTGCTGCTGCTCAAGGAGGACCACCTGATGAGCGCCATGAACATCA
AGCTGGGGCCCGCCCTGAAGATCTACGCCCGCATCAGCATGCTCAAGGACTCCTAG

Translation (881 aa):
MENELPVPHTSSSACATSSTSGASSSSGCNNSSSGGSGRPTGPQISVYSGIPDRQTVQVIQQALHRQPST
AAQYLQQMYAAQQQHLMLQTAALQQQHLSSAQLQSLAAVQQASLVSNRQGSTSGSNVSAQAPAQSSSINL
AASPAAAQLLNRAQSVNSAAASGIAQQAVLLGNTSSPALTASQAQMYLRAQMAQPGNLVQVARSLGGTVP
LSPQLIFTPTATVATVQPELGTGSPARPPTPAQVQNLTLRTQQTPAAAASGPTPTQPVLPSLALKPTPGG
SQPLPTPAQSRNTAQASPAGAKPGIADSVMEPHKKGDGNSSVPGSMEGRAGLSRTVPAVAAHPLIAPAYA
QLQPHQLLPQPSSKHLQPQFVIQQQPQPQQQQPPPQQSRPVLQAEPHPQLASVSPSVALQPSSEAHAMPL
GPVTPALPLQCPTANLHKPGGSQQCHPPTPDTGPQNGHPEGVPHTPQRRFQHTSAVILQLQPASPVPQQC
VPDDWKEVAPGEKSVPETRSGPSPHQQAIVTAMPGGLPVPTSPNIQPSPAHETGQGIVHALTDLSSPGMT
SGNGNSASSIAGTAPQNGENKPPQAIVKPQILTHVIEGFVIQEGAEPFPVGRSSLLVGNLKKKYAQGFLP
EKLPQQDHTTTTDSEMEEPYLQESKEEGAPLKLKCELCGRVDFAYKFKRSKRFCSMACAKRYNVGCTKRV
GLFHSDRSKLQKAGAATHNRRRASKASLPPLTKDTKKQPTGTVPLSVTAALQLTHSQEDSSRCSDNSSYE
EPLSPISASSSTSRRRQGQRDLELPDMHMRDLVGMGHHFLPSEPTKWNVEDVYEFIRSLPGCQEIAEEFR
AQEIDGQALLLLKEDHLMSAMNIKLGPALKIYARISMLKDS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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