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Report for CCDS90950.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90950.1 Public Homo sapiens 1 ELAVL4 24 110 108 CCDS HistoryNCBI Gene:1996Re-query CCDS DB by CCDS ID:90950.1Re-query CCDS DB by GeneID:1996See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90950.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000650764.1 ENSP00000498979.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000650764.1Link to Ensembl Protein Viewer:ENSP00000498979.1Re-query CCDS DB by Nucleotide ID:ENST00000650764Re-query CCDS DB by Protein ID:ENSP00000498979
Current member NCBI NM_001410787.1 NP_001397716.1 Accepted alive Link to Nucleotide Sequence:NM_001410787.1Link to Protein Sequence:NP_001397716.1Re-query CCDS DB by Nucleotide ID:NM_001410787Re-query CCDS DB by Protein ID:NP_001397716Link to BLAST:NP_001397716.1

Chromosomal Locations for CCDS 90950.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 50109190 50109198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50144957 50145197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50177089 50177192 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50193765 50193918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50195561 50195786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 50200851 50201178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1062 nt):
ATGGTTATGATAATTAGCACCATGGAGCCTCAGGTGTCAAATGGTCCGACATCCAATACAAGCAATGGAC
CCTCCAGCAACAACAGAAACTGTCCTTCTCCCATGCAAACAGGGGCAACCACAGATGACAGCAAAACCAA
CCTCATCGTCAACTATTTACCCCAGAATATGACCCAAGAAGAATTCAGGAGTCTCTTCGGGAGCATTGGT
GAAATAGAATCCTGCAAACTTGTGAGAGACAAAATTACAGGACAGAGTTTAGGGTATGGATTTGTTAACT
ATATTGATCCAAAGGATGCAGAGAAAGCCATCAACACTTTAAATGGACTCAGACTCCAGACCAAAACCAT
AAAGGTCTCATATGCCCGTCCGAGCTCTGCCTCAATCAGGGATGCTAACCTCTATGTTAGCGGCCTTCCC
AAAACCATGACCCAGAAGGAACTGGAGCAACTTTTCTCGCAATACGGCCGTATCATCACCTCACGAATCC
TGGTTGATCAAGTCACAGGAGTGTCCAGAGGGGTGGGATTCATCCGCTTTGATAAGAGGATTGAGGCAGA
AGAAGCCATCAAAGGGCTGAATGGCCAGAAGCCCAGCGGTGCTACGGAACCGATTACTGTGAAGTTTGCC
AACAACCCCAGCCAGAAGTCCAGCCAGGCCCTGCTCTCCCAGCTCTACCAGTCCCCCAACCGGCGCTACC
CAGGTCCACTTCACCACCAGGCTCAGAGGTTCAGGTTCTCCCCAATTACCATTGATGGAATGACAAGCCT
TGTGGGAATGAACATCCCTGGTCACACAGGAACTGGGTGGTGCATCTTTGTCTACAACCTGTCCCCCGAT
TCCGATGAGAGTGTCCTCTGGCAGCTCTTTGGCCCCTTTGGAGCAGTGAACAACGTAAAGGTGATTCGTG
ACTTCAACACCAACAAGTGCAAGGGATTCGGCTTTGTCACCATGACCAACTATGATGAGGCGGCCATGGC
CATCGCCAGCCTCAACGGGTACCGCCTGGGAGACAGAGTGTTGCAAGTTTCCTTTAAAACCAACAAAGCC
CACAAGTCCTGA

Translation (353 aa):
MVMIISTMEPQVSNGPTSNTSNGPSSNNRNCPSPMQTGATTDDSKTNLIVNYLPQNMTQEEFRSLFGSIG
EIESCKLVRDKITGQSLGYGFVNYIDPKDAEKAINTLNGLRLQTKTIKVSYARPSSASIRDANLYVSGLP
KTMTQKELEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGLNGQKPSGATEPITVKFA
NNPSQKSSQALLSQLYQSPNRRYPGPLHHQAQRFRFSPITIDGMTSLVGMNIPGHTGTGWCIFVYNLSPD
SDESVLWQLFGPFGAVNNVKVIRDFNTNKCKGFGFVTMTNYDEAAMAIASLNGYRLGDRVLQVSFKTNKA
HKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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