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Report for CCDS30716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30716.1 Public Homo sapiens 1 TUT4 24 110 108 CCDS HistoryNCBI Gene:23318Re-query CCDS DB by CCDS ID:30716.1Re-query CCDS DB by GeneID:23318See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30716.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371544.7 ENSP00000360599.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371544.7Link to Ensembl Protein Viewer:ENSP00000360599.3Re-query CCDS DB by Nucleotide ID:ENST00000371544Re-query CCDS DB by Protein ID:ENSP00000360599
Original member Current member NCBI NM_015269.2 NP_056084.1 Accepted alive Link to Nucleotide Sequence:NM_015269.2Link to Protein Sequence:NP_056084.1Re-query CCDS DB by Nucleotide ID:NM_015269Re-query CCDS DB by Protein ID:NP_056084Link to BLAST:NP_056084.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056084.1 1644 Q5TAX3-1 1644 100% 0 0

Chromosomal Locations for CCDS 30716.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 52423935 52424002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52425349 52425507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52431013 52431460 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52435365 52435465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52436755 52436975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52438220 52438335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52445787 52445869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52445957 52446004 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52446265 52446442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52446590 52446667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52458336 52458449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52461134 52461223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52461513 52461616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52461712 52461769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52465070 52465173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52468181 52468267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52471952 52472102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52474832 52475535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52477708 52477882 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52481423 52481635 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52481804 52481923 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52488909 52489035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52490732 52490801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52493611 52493662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52495427 52495515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52497006 52497183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52509596 52509712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52515891 52516054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 52525563 52526280 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4935 nt):
ATGGAAGAGTCTAAAACCTTAAAAAGTGAAAATCATGAACCAAAGAAGAATGTTATTTGTGAAGAAAGCA
AAGCAGTTCAAGTTATAGGTAATCAAACATTGAAAGCTAGAAATGATAAATCCGTAAAAGAAATTGAGAA
CAGCTCTCCAAATAGGAATAGTAGTAAAAAAAATAAGCAAAATGATATTTGTATAGAAAAAACAGAAGTT
AAATCATGTAAAGTAAATGCTGCCAACCTTCCAGGTCCTAAAGATTTGGGGTTAGTCCTTCGAGATCAAA
GTCATTGCAAAGCAAAAAAATTTCCTAATTCACCGGTGAAAGCCGAAAAGGCAACCATTTCACAGGCAAA
ATCAGAAAAGGCAACCAGTTTACAGGCAAAAGCAGAAAAATCACCAAAGTCACCTAATTCAGTGAAAGCA
GAAAAAGCATCCAGTTATCAGATGAAGTCAGAAAAAGTACCAAGTTCACCAGCAGAAGCAGAAAAGGGAC
CCAGTTTACTGTTGAAAGACATGAGACAGAAGACAGAATTACAACAGATTGGAAAAAAAATTCCAAGCTC
CTTTACTTCTGTGGACAAAGTGAATATTGAAGCTGTAGGGGGAGAAAAATGTGCTCTGCAAAACTCACCA
CGATCTCAGAAGCAACAGACATGTACAGATAATACTGGTGATTCTGATGATAGTGCTTCAGGAATTGAAG
ACGTATCGGACGATTTAAGTAAAATGAAGAATGATGAATCTAATAAAGAAAATTCTTCAGAGATGGACTA
CTTAGAAAATGCCACTGTGATAGATGAATCTGCATTGACACCTGAGCAGAGGCTGGGGTTGAAACAAGCA
GAAGAACGCTTAGAAAGAGATCACATCTTTCGACTTGAAAAACGATCACCAGAATATACCAATTGTCGGT
ATCTATGCAAACTTTGCTTAATTCACATTGAAAATATCCAGGGGGCTCATAAACATATAAAGGAGAAACG
ACATAAGAAAAATATTTTGGAAAAACAAGAAGAAAGTGAGCTTCGTTCTCTGCCACCTCCTTCCCCTGCC
CACTTGGCTGCTTTAAGTGTTGCAGTCATTGAATTAGCAAAAGAACATGGAATAACAGATGATGACCTCA
GAGTCCGTCAGGAAATTGTGGAGGAAATGTCAAAGGTTATAACGACATTTTTACCAGAATGTTCACTTAG
GTTGTATGGCTCATCTCTGACTAGATTTGCTCTGAAAAGTAGTGATGTTAATATAGATATAAAATTTCCT
CCCAAGATGAATCATCCAGATCTTCTGATAAAAGTACTTGGGATTTTAAAGAAAAATGTATTATATGTAG
ATGTGGAATCTGATTTTCACGCTAAAGTTCCTGTTGTGGTGTGCAGAGATCGAAAAAGTGGTTTACTTTG
TAGAGTGAGTGCAGGAAACGATATGGCATGTCTCACTACTGATTTACTTACTGCCCTTGGCAAAATAGAA
CCTGTCTTTATTCCCTTGGTGTTAGCCTTTCGCTACTGGGCTAAGTTGTGCTATATTGACTCCCAAACTG
ATGGTGGAATCCCTTCTTACTGTTTTGCTTTAATGGTGATGTTTTTTCTACAACAGAGAAAACCCCCTCT
TCTTCCTTGCTTACTTGGAAGTTGGATTGAAGGCTTTGACCCAAAAAGAATGGATGACTTTCAGCTGAAG
GGCATAGTAGAAGAGAAGTTTGTGAAGTGGGAATGTAATTCAAGTAGTGCAACTGAGAAAAACTCAATTG
CTGAGGAAAACAAAGCTAAGGCAGACCAACCAAAAGATGATACCAAGAAGACAGAAACAGACAACCAAAG
TAATGCCATGAAGGAAAAACATGGCAAATCTCCTTTAGCATTGGAAACACCAAATCGGGTATCCTTGGGA
CAGTTATGGTTAGAGCTGCTTAAATTCTACACACTGGATTTTGCTTTGGAGGAATATGTCATATGTGTAC
GGATACAAGATATTTTAACAAGAGAAAATAAAAACTGGCCTAAAAGGCGAATAGCCATTGAAGATCCATT
TTCAGTCAAGAGGAATGTTGCACGGAGCTTAAACAGCCAGCTGGTTTACGAATATGTTGTGGAGAGATTT
AGGGCAGCTTATCGGTATTTTGCCTGTCCTCAGACGAAGGGTGGAAATAAGTCTACAGTGGATTTCAAGA
AAAGAGAGAAGGGGAAAATAAGCAATAAGAAACCAGTCAAGTCGAACAATATGGCAACCAATGGTTGTAT
TCTGCTTGGGGAAACCACAGAAAAAATAAATGCAGAAAGAGAGCAACCTGTTCAATGTGATGAAATGGAC
TGTACATCACAGAGATGTATTATTGACAACAACAATTTGTTGGTAAATGAACTAGATTTTGCTGACCACG
GACAGGACTCTTCATCTCTTTCTACCAGCAAAAGCAGTGAAATAGAGCCAAAATTAGATAAGAAACAAGA
TGATTTAGCGCCTTCAGAAACTTGTTTAAAAAAAGAGCTCAGCCAATGTAATTGCATTGATTTGTCTAAG
TCGCCTGACCCAGATAAATCTACTGGAACAGACTGCAGGTCAAATTTAGAAACAGAGAGTTCACATCAGA
GTGTGTGCACCGACACATCTGCTACCTCTTGCAACTGCAAAGCTACAGAAGATGCTTCTGACCTTAATGA
TGATGATAACCTCCCCACCCAGGAATTATATTATGTGTTTGATAAGTTTATTTTAACCTCTGGCAAGCCA
CCAACGATAGTATGCAGCATCTGCAAAAAGGATGGCCATTCAAAGAATGATTGCCCAGAGGATTTTAGGA
AAATTGATTTAAAACCTCTACCACCAATGACAAACCGATTTCGGGAAATACTTGATTTAGTATGTAAAAG
ATGTTTTGATGAGTTATCACCACCTTGTTCTGAACAACACAACAGGGAGCAAATTTTAATTGGCTTGGAA
AAGTTTATTCAAAAAGAATATGATGAAAAGGCAAGGTTGTGCTTATTTGGCTCTTCTAAGAATGGATTTG
GATTTCGTGATAGTGATCTGGATATTTGTATGACCCTGGAAGGCCATGAAAATGCAGAGAAATTAAATTG
TAAGGAAATAATTGAAAATTTGGCAAAAATTCTTAAGAGACATCCAGGTTTAAGAAACATTTTGCCTATA
ACTACTGCCAAAGTGCCTATAGTAAAATTTGAACACAGGCGAAGTGGGTTAGAAGGCGATATCAGTTTAT
ATAATACGTTGGCTCAACATAACACAAGAATGCTAGCTACTTATGCAGCTATTGATCCTAGAGTGCAGTA
TTTGGGATATACTATGAAAGTGTTTGCTAAGCGATGTGACATTGGGGATGCTTCCAGGGGAAGTTTATCT
TCATATGCATATATCCTTATGGTGCTGTACTTTCTGCAGCAGAGAAAGCCACCTGTTATCCCAGTTCTAC
AAGAGATCTTTGATGGAAAACAGATTCCACAGAGAATGGTTGATGGATGGAATGCTTTCTTCTTTGATAA
AACAGAAGAACTGAAAAAGCGTTTACCTTCACTTGGAAAGAACACAGAATCATTAGGGGAGCTTTGGCTG
GGACTGCTTCGTTTCTATACTGAAGAGTTTGATTTCAAGGAATATGTAATTAGCATTCGGCAGAAAAAGC
TGTTGACAACTTTTGAGAAGCAGTGGACTTCCAAGTGCATTGCAATTGAAGACCCTTTTGACTTGAATCA
TAACCTTGGTGCTGGAGTTTCCAGAAAAATGACCAATTTCATCATGAAAGCATTTATCAATGGAAGGAAA
CTTTTTGGTACCCCTTTTTATCCACTCATTGGCAGAGAAGCTGAGTACTTCTTTGATTCCAGAGTATTAA
CAGATGGAGAACTGGCTCCCAATGATAGATGTTGCCGTGTGTGTGGAAAAATAGGCCACTACATGAAAGA
CTGCCCTAAAAGGAAAAGTTTACTGTTTAGACTAAAGAAGAAAGACAGTGAAGAAGAGAAGGAAGGGAAT
GAAGAAGAGAAAGATTCCCGAGATGTTCTTGACCCCCGAGACCTCCACGATACTCGAGACTTTAGAGACC
CGAGAGACCTCAGATGTTTTATATGTGGAGATGCTGGACATGTACGAAGGGAGTGCCCAGAGGTCAAGCT
GGCCCGTCAGAGGAATAGCAGTGTGGCAGCAGCCCAGCTGGTCCGCAACCTTGTAAATGCTCAACAGGTG
GCTGGTTCAGCTCAGCAACAGGGTGATCAGTCCATAAGGACTAGACAGTCATCAGAATGTTCTGAATCAC
CATCTTATTCTCCTCAGCCTCAGCCATTTCCACAGAACTCTTCCCAGTCAGCTGCTATTACTCAGCCTTC
ATCTCAGCCAGGATCCCAACCTAAGCTTGGCCCACCTCAGCAGGGAGCCCAACCTCCCCATCAGGTCCAG
ATGCCACTGTATAACTTTCCCCAGTCACCACCAGCTCAGTATTCTCCCATGCACAATATGGGATTGTTGC
CAATGCACCCTCTCCAGATCCCTGCCCCGTCCTGGCCCATCCATGGCCCAGTGATCCACTCTGCACCAGG
CAGTGCCCCCAGCAATATTGGCCTAAATGATCCCAGCATCATCTTTGCACAGCCTGCTGCCAGACCTGTG
GCAATCCCTAACACGTCTCACGATGGACACTGGCCCCGTACTGTGGCTCCAAATTCCCTGGTAAACAGTG
GTGCAGTGGGGAATTCAGAGCCAGGCTTTCGAGGACTGACTCCTCCAATTCCTTGGGAACATGCACCGCG
TCCCCATTTCCCCCTTGTCCCAGCTTCGTGGCCTTATGGTTTGCATCAAAACTTCATGCATCAGGGAAAT
GCCCGATTCCAGCCCAACAAACCTTTCTATACTCAAGACAGATGTGCCACCCGTCGGTGTAGAGAGCGTT
GTCCCCACCCACCAAGAGGAAACGTGTCGGAGTAA

Translation (1644 aa):
MEESKTLKSENHEPKKNVICEESKAVQVIGNQTLKARNDKSVKEIENSSPNRNSSKKNKQNDICIEKTEV
KSCKVNAANLPGPKDLGLVLRDQSHCKAKKFPNSPVKAEKATISQAKSEKATSLQAKAEKSPKSPNSVKA
EKASSYQMKSEKVPSSPAEAEKGPSLLLKDMRQKTELQQIGKKIPSSFTSVDKVNIEAVGGEKCALQNSP
RSQKQQTCTDNTGDSDDSASGIEDVSDDLSKMKNDESNKENSSEMDYLENATVIDESALTPEQRLGLKQA
EERLERDHIFRLEKRSPEYTNCRYLCKLCLIHIENIQGAHKHIKEKRHKKNILEKQEESELRSLPPPSPA
HLAALSVAVIELAKEHGITDDDLRVRQEIVEEMSKVITTFLPECSLRLYGSSLTRFALKSSDVNIDIKFP
PKMNHPDLLIKVLGILKKNVLYVDVESDFHAKVPVVVCRDRKSGLLCRVSAGNDMACLTTDLLTALGKIE
PVFIPLVLAFRYWAKLCYIDSQTDGGIPSYCFALMVMFFLQQRKPPLLPCLLGSWIEGFDPKRMDDFQLK
GIVEEKFVKWECNSSSATEKNSIAEENKAKADQPKDDTKKTETDNQSNAMKEKHGKSPLALETPNRVSLG
QLWLELLKFYTLDFALEEYVICVRIQDILTRENKNWPKRRIAIEDPFSVKRNVARSLNSQLVYEYVVERF
RAAYRYFACPQTKGGNKSTVDFKKREKGKISNKKPVKSNNMATNGCILLGETTEKINAEREQPVQCDEMD
CTSQRCIIDNNNLLVNELDFADHGQDSSSLSTSKSSEIEPKLDKKQDDLAPSETCLKKELSQCNCIDLSK
SPDPDKSTGTDCRSNLETESSHQSVCTDTSATSCNCKATEDASDLNDDDNLPTQELYYVFDKFILTSGKP
PTIVCSICKKDGHSKNDCPEDFRKIDLKPLPPMTNRFREILDLVCKRCFDELSPPCSEQHNREQILIGLE
KFIQKEYDEKARLCLFGSSKNGFGFRDSDLDICMTLEGHENAEKLNCKEIIENLAKILKRHPGLRNILPI
TTAKVPIVKFEHRRSGLEGDISLYNTLAQHNTRMLATYAAIDPRVQYLGYTMKVFAKRCDIGDASRGSLS
SYAYILMVLYFLQQRKPPVIPVLQEIFDGKQIPQRMVDGWNAFFFDKTEELKKRLPSLGKNTESLGELWL
GLLRFYTEEFDFKEYVISIRQKKLLTTFEKQWTSKCIAIEDPFDLNHNLGAGVSRKMTNFIMKAFINGRK
LFGTPFYPLIGREAEYFFDSRVLTDGELAPNDRCCRVCGKIGHYMKDCPKRKSLLFRLKKKDSEEEKEGN
EEEKDSRDVLDPRDLHDTRDFRDPRDLRCFICGDAGHVRRECPEVKLARQRNSSVAAAQLVRNLVNAQQV
AGSAQQQGDQSIRTRQSSECSESPSYSPQPQPFPQNSSQSAAITQPSSQPGSQPKLGPPQQGAQPPHQVQ
MPLYNFPQSPPAQYSPMHNMGLLPMHPLQIPAPSWPIHGPVIHSAPGSAPSNIGLNDPSIIFAQPAARPV
AIPNTSHDGHWPRTVAPNSLVNSGAVGNSEPGFRGLTPPIPWEHAPRPHFPLVPASWPYGLHQNFMHQGN
ARFQPNKPFYTQDRCATRRCRERCPHPPRGNVSE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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