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Report for CCDS30791.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30791.1 Public Homo sapiens 1 PSRC1 24 110 108 CCDS HistoryNCBI Gene:84722Re-query CCDS DB by CCDS ID:30791.1Re-query CCDS DB by GeneID:84722See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30791.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369904.7 ENSP00000358920.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000369904.7Link to Ensembl Protein Viewer:ENSP00000358920.3Re-query CCDS DB by Nucleotide ID:ENST00000369904Re-query CCDS DB by Protein ID:ENSP00000358920
Original member Current member NCBI NM_001005290.4 NP_001005290.1 Accepted alive Link to Nucleotide Sequence:NM_001005290.4Link to Protein Sequence:NP_001005290.1Re-query CCDS DB by Nucleotide ID:NM_001005290Re-query CCDS DB by Protein ID:NP_001005290Link to BLAST:NP_001005290.1
Original member Current member NCBI NM_001394003.1 NP_001380932.1 Accepted alive Link to Nucleotide Sequence:NM_001394003.1Link to Protein Sequence:NP_001380932.1Re-query CCDS DB by Nucleotide ID:NM_001394003Re-query CCDS DB by Protein ID:NP_001380932Link to BLAST:NP_001380932.1
Original member Current member NCBI NM_001394004.1 NP_001380933.1 Accepted alive Link to Nucleotide Sequence:NM_001394004.1Link to Protein Sequence:NP_001380933.1Re-query CCDS DB by Nucleotide ID:NM_001394004Re-query CCDS DB by Protein ID:NP_001380933Link to BLAST:NP_001380933.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005290.1 310 Q6PGN9-3 310 100% 0 0
NP_001380932.1 310 Q6PGN9-3 310 100% 0 0
NP_001380933.1 310 Q6PGN9-3 310 100% 0 0

Chromosomal Locations for CCDS 30791.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 109280121 109280156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109280396 109280489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109280777 109280916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109281108 109281251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109281619 109282060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109282518 109282575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 109282680 109282698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGAGGATTTGGAGGAAGATGTAAGGTTTATTGTGGATGAGACCTTGGACTTTGGGGGGCTGTCACCAT
CTGACAGCCGTGAGGAGGAAGACATAACAGTGTTGGTGACTCCAGAGAAACCACTTCGACGGGGCCTCTC
CCACCGAAGTGACCCAAATGCAGTGGCACCTGCCCCCCAGGGTGTGAGGCTCAGCCTAGGCCCCCTCAGT
CCAGAGAAGCTGGAGGAGATCCTCGATGAGGCCAACCGGCTGGCCGCTCAGCTGGAGCAGTGTGCCCTGC
AGGATCGGGAGAGCGCAGGCGAGGGCCTGGGGCCTCGCCGAGTGAAGCCCAGTCCTCGGCGGGAGACCTT
TGTGCTGAAGGATAGTCCTGTCCGAGACCTGCTGCCCACTGTGAACTCTTTGACGCGGAGCACCCCCTCC
CCAAGCAGCCTGACGCCTCGACTCCGGAGTAATGATAGGAAGGGGTCAGTCAGGGCTCTCCGGGCTACAT
CTGGAAAGAGGCCCTCCAACATGAAGAGGGAGTCACCCACTTGCAATCTGTTCCCTGCATCCAAAAGCCC
AGCATCTTCTCCTCTTACCCGATCGACTCCCCCAGTCCGGGGGAGAGCCGGGCCCAGTGGGAGAGCAGCA
GCCAGTGAGGAGACCAGAGCAGCCAAGTTGCGGGCCTGCCAGCCGAATGCCACTCACCAGCCGGAGTGTG
CCACCTGGCAGAGGTGCCCTACCTCCGGATTCTCTGTCAACTCGAAAAGGGCTTCCAAGACCAAGCACTG
CAGGACACAGAGTGCGGGAAAGTGGACACAAGGTTCCTGTTTCCCAGCGACTAAATCTTCCTGTCATGGG
TGCCACTCGCAGCAATCTGCAGCCCCCCAGGAAAGTGGCAGTCCCAGGACCTACCAGGTAAAGAGATCAG
GACAGCAAGCAAGACTTCAGTAG

Translation (310 aa):
MEDLEEDVRFIVDETLDFGGLSPSDSREEEDITVLVTPEKPLRRGLSHRSDPNAVAPAPQGVRLSLGPLS
PEKLEEILDEANRLAAQLEQCALQDRESAGEGLGPRRVKPSPRRETFVLKDSPVRDLLPTVNSLTRSTPS
PSSLTPRLRSNDRKGSVRALRATSGKRPSNMKRESPTCNLFPASKSPASSPLTRSTPPVRGRAGPSGRAA
ASEETRAAKLRACQPNATHQPECATWQRCPTSGFSVNSKRASKTKHCRTQSAGKWTQGSCFPATKSSCHG
CHSQQSAAPQESGSPRTYQVKRSGQQARLQ


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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