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Report for CCDS44209.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44209.1 Public Homo sapiens 1 FMO5 24 110 108 CCDS HistoryNCBI Gene:2330Re-query CCDS DB by CCDS ID:44209.1Re-query CCDS DB by GeneID:2330See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44209.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000441068.6 ENSP00000416011.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000441068.6Link to Ensembl Protein Viewer:ENSP00000416011.2Re-query CCDS DB by Nucleotide ID:ENST00000441068Re-query CCDS DB by Protein ID:ENSP00000416011
Original member Current member EBI ENST00000578284.5 ENSP00000462062.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000578284.5Link to Ensembl Protein Viewer:ENSP00000462062.2Re-query CCDS DB by Nucleotide ID:ENST00000578284Re-query CCDS DB by Protein ID:ENSP00000462062
Original member Current member NCBI NM_001144829.3 NP_001138301.1 Accepted alive Link to Nucleotide Sequence:NM_001144829.3Link to Protein Sequence:NP_001138301.1Re-query CCDS DB by Nucleotide ID:NM_001144829Re-query CCDS DB by Protein ID:NP_001138301Link to BLAST:NP_001138301.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138301.1 464 P49326-3 464 100% 0 0

Chromosomal Locations for CCDS 44209.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 147184492 147184630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147190177 147190249 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147201152 147201504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147208852 147209051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147212393 147212535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147213308 147213470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147215754 147215942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 147224895 147225029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1395 nt):
ATGACTAAGAAAAGAATTGCTGTGATTGGGGGAGGAGTGAGCGGGCTCTCTTCCATCAAGTGCTGCGTAG
AAGAAGGCTTGGAACCTGTCTGCTTTGAAAGGACTGATGACATCGGAGGGCTCTGGAGGTTCCAGGAAAA
TCCTGAAGAAGGAAGGGCCAGTATTTACAAATCAGTGATCATCAATACTTCTAAAGAGATGATGTGCTTC
AGTGACTATCCAATCCCAGATCATTATCCCAACTTCATGCATAATGCCCAGGTCCTGGAGTATTTCAGGA
TGTATGCCAAAGAATTTGACCTTCTAAAGTATATTCGATTTAAGACCACTGTGTGCAGTGTGAAGAAGCA
GCCTGATTTTGCCACTTCAGGCCAATGGGAAGTGGTCACTGAATCTGAAGGGAAAAAGGAGATGAATGTC
TTTGATGGAGTCATGGTTTGCACTGGCCATCACACCAATGCTCATCTACCTCTGGAAAGCTTCCCTGGAA
TTGAGAAGTTCAAAGGGCAGTACTTCCACAGTCGAGACTATAAGAACCCAGAGGGATTCACTGGAAAGAG
AGTCATTATAATTGGCATTGGGAATTCTGGAGGGGATCTGGCTGTAGAGATTAGCCAAACAGCCAAGCAG
GTTTTCCTCAGCACCAGGAGAGGGGCTTGGATCCTGAATCGTGTAGGGGACTACGGATATCCTGCTGATG
TGTTGTTCTCTTCTCGACTTACACATTTTATATGGAAGATCTGTGGCCAATCATTAGCAAACAAATATTT
GGAAAAAAAGATAAACCAAAGGTTTGACCATGAAATGTTTGGCCTGAAGCCTAAACACAGAGCTCTGAGT
CAGCATCCAACCTTAAATGATGACCTGCCAAATCGTATCATTTCTGGCTTGGTGAAAGTGAAAGGAAATG
TGAAGGAATTCACGGAGACAGCTGCCATATTTGAGGATGGCTCCAGGGAGGATGACATTGATGCTGTTAT
CTTTGCCACAGGCTATAGCTTTGACTTTCCATTTCTGGAAGATTCCGTCAAAGTGGTCAAAAACAAGATA
TCCCTGTATAAAAAGGTCTTCCCTCCTAACCTGGAAAGGCCAACTCTTGCAATCATAGGCTTGATTCAGC
CCTTAGGAGCCATTATGCCCATTTCAGAGCTCCAAGGACGCTGGGCCACTCAGGTATTTAAAGGTCTAAA
GACATTGCCCTCACAGAGTGAAATGATGGCAGAAATATCTAAAGCTCAAGAGGAAATTGACAAAAGTCTA
ACCATGAGAAAAACATCAGACAAACCCAAGTTGAAGAATATTCTACAAATACCTGACTACCTCAAAACTG
TCAAGATCATCAACAAAGAAAGTCTGAGAAATTGTCCCGGAATAAAGGGGCCTAAGGAGACATAA

Translation (464 aa):
MTKKRIAVIGGGVSGLSSIKCCVEEGLEPVCFERTDDIGGLWRFQENPEEGRASIYKSVIINTSKEMMCF
SDYPIPDHYPNFMHNAQVLEYFRMYAKEFDLLKYIRFKTTVCSVKKQPDFATSGQWEVVTESEGKKEMNV
FDGVMVCTGHHTNAHLPLESFPGIEKFKGQYFHSRDYKNPEGFTGKRVIIIGIGNSGGDLAVEISQTAKQ
VFLSTRRGAWILNRVGDYGYPADVLFSSRLTHFIWKICGQSLANKYLEKKINQRFDHEMFGLKPKHRALS
QHPTLNDDLPNRIISGLVKVKGNVKEFTETAAIFEDGSREDDIDAVIFATGYSFDFPFLEDSVKVVKNKI
SLYKKVFPPNLERPTLAIIGLIQPLGAIMPISELQGRWATQVFKGLKTLPSQSEMMAEISKAQEEIDKSL
TMRKTSDKPKLKNILQIPDYLKTVKIINKESLRNCPGIKGPKET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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