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Report for CCDS30926.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30926.2 Public Homo sapiens 1 FCRLA 24 110 108 CCDS HistoryNCBI Gene:84824Re-query CCDS DB by CCDS ID:30926.2Re-query CCDS DB by GeneID:84824See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 30926.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000236938.12 ENSP00000236938.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000236938.12Link to Ensembl Protein Viewer:ENSP00000236938.7Re-query CCDS DB by Nucleotide ID:ENST00000236938Re-query CCDS DB by Protein ID:ENSP00000236938
Original member Current member NCBI NM_032738.4 NP_116127.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032738.4Link to Protein Sequence:NP_116127.4Re-query CCDS DB by Nucleotide ID:NM_032738Re-query CCDS DB by Protein ID:NP_116127Link to BLAST:NP_116127.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116127.4 359 Q7L513-1 359 100% 0 0

Chromosomal Locations for CCDS 30926.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 161707265 161707343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161710760 161710912 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161711208 161711474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161711934 161712218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 161713085 161713380 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1080 nt):
ATGAAGCTGGGCTGTGTCCTCATGGCCTGGGCCCTCTACCTTTCCCTTGGTGTGCTCTGGGTGGCCCAGA
TGCTACTGGCTGCCAGTTTTGAGACGCTGCAGTGTGAGGGACCTGTCTGCACTGAGGAGAGCAGCTGCCA
CACGGAGGATGACTTGACTGATGCAAGGGAAGCTGGCTTCCAGGTCAAGGCCTACACTTTCAGTGAACCC
TTCCACCTGATTGTGTCCTATGACTGGCTGATCCTCCAAGGTCCAGCCAAGCCAGTTTTTGAAGGGGACC
TGCTGGTTCTGCGCTGCCAGGCCTGGCAAGACTGGCCACTGACTCAGGTGACCTTCTACCGAGATGGCTC
AGCTCTGGGTCCCCCCGGGCCTAACAGGGAATTCTCCATCACCGTGGTACAAAAGGCAGACAGCGGGCAC
TACCACTGCAGTGGCATCTTCCAGAGCCCTGGTCCTGGGATCCCAGAAACAGCATCTGTTGTGGCTATCA
CAGTCCAAGAACTGTTTCCAGCGCCAATTCTCAGAGCTGTACCCTCAGCTGAACCCCAAGCAGGAAGCCC
CATGACCCTGAGTTGTCAGACAAAGTTGCCCCTGCAGAGGTCAGCTGCCCGCCTCCTCTTCTCCTTCTAC
AAGGATGGAAGGATAGTGCAAAGCAGGGGGCTCTCCTCAGAATTCCAGATCCCCACAGCTTCAGAAGATC
ACTCCGGGTCATACTGGTGTGAGGCAGCCACTGAGGACAACCAAGTTTGGAAACAGAGCCCCCAGCTAGA
GATCAGAGTGCAGGGTGCTTCCAGCTCTGCTGCACCTCCCACATTGAATCCAGCTCCTCAGAAATCAGCT
GCTCCAGGAACTGCTCCTGAGGAGGCCCCTGGGCCTCTGCCTCCGCCGCCAACCCCATCTTCTGAGGATC
CAGGCTTTTCTTCTCCTCTGGGGATGCCAGATCCTCATCTGTATCACCAGATGGGCCTTCTTCTCAAACA
CATGCAGGATGTGAGAGTCCTCCTCGGTCACCTGCTCATGGAGTTGAGGGAATTATCTGGCCACCGGAAG
CCTGGGACCACAAAGGCTACTGCTGAATAG

Translation (359 aa):
MKLGCVLMAWALYLSLGVLWVAQMLLAASFETLQCEGPVCTEESSCHTEDDLTDAREAGFQVKAYTFSEP
FHLIVSYDWLILQGPAKPVFEGDLLVLRCQAWQDWPLTQVTFYRDGSALGPPGPNREFSITVVQKADSGH
YHCSGIFQSPGPGIPETASVVAITVQELFPAPILRAVPSAEPQAGSPMTLSCQTKLPLQRSAARLLFSFY
KDGRIVQSRGLSSEFQIPTASEDHSGSYWCEAATEDNQVWKQSPQLEIRVQGASSSAAPPTLNPAPQKSA
APGTAPEEAPGPLPPPPTPSSEDPGFSSPLGMPDPHLYHQMGLLLKHMQDVRVLLGHLLMELRELSGHRK
PGTTKATAE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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