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Report for CCDS81420.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
81420.1 Public Homo sapiens 1 FAM72A 24 110 108 CCDS HistoryNCBI Gene:729533Re-query CCDS DB by CCDS ID:81420.1Re-query CCDS DB by GeneID:729533See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 20, NCBI annotation release 108, Ensembl annotation release 85

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 81420.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367129.6 ENSP00000356097.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367129.6Link to Ensembl Protein Viewer:ENSP00000356097.2Re-query CCDS DB by Nucleotide ID:ENST00000367129Re-query CCDS DB by Protein ID:ENSP00000356097
Original member Current member NCBI NM_001317901.2 NP_001304830.1 Accepted alive Link to Nucleotide Sequence:NM_001317901.2Link to Protein Sequence:NP_001304830.1Re-query CCDS DB by Nucleotide ID:NM_001317901Re-query CCDS DB by Protein ID:NP_001304830Link to BLAST:NP_001304830.1
Original member Current member NCBI NM_001385243.1 NP_001372172.1 Accepted alive Link to Nucleotide Sequence:NM_001385243.1Link to Protein Sequence:NP_001372172.1Re-query CCDS DB by Nucleotide ID:NM_001385243Re-query CCDS DB by Protein ID:NP_001372172Link to BLAST:NP_001372172.1
Original member Current member NCBI NM_001385244.1 NP_001372173.1 Accepted alive Link to Nucleotide Sequence:NM_001385244.1Link to Protein Sequence:NP_001372173.1Re-query CCDS DB by Nucleotide ID:NM_001385244Re-query CCDS DB by Protein ID:NP_001372173Link to BLAST:NP_001372173.1
Original member Current member NCBI NM_001385245.1 NP_001372174.1 Accepted alive Link to Nucleotide Sequence:NM_001385245.1Link to Protein Sequence:NP_001372174.1Re-query CCDS DB by Nucleotide ID:NM_001385245Re-query CCDS DB by Protein ID:NP_001372174Link to BLAST:NP_001372174.1

Chromosomal Locations for CCDS 81420.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 206187279 206187373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206195752 206195876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206199807 206199884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206203844 206203995 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (450 nt):
ATGCCAACGACGACTGCCCTACGGTGGACCGCGGCTGCCCGTGTGCGGAGGAAAGGGAGAGGCGGCTGGG
TGCCGGCTGCGCTGCGGTCCGTGAGCCAGGACGGAGTCCCAGGCTGTACAGTGATGGGCGGAGAGACTCG
CAGTCCTGAGAACGCAGTGGACTTCACTGGAAGATGCTATTTCACCAAAATCTGCAAATGTAAACTGAAG
GACATCGCATGTTTAAAATGTGGGAACATTGTAGGTTATCATGTGATTGTTCCATGTAGTTCCTGTCTTC
TTTCCTGCAACAACGGACACTTCTGGATGTTTCACAGCCAGGCAGTTTATGATATTAACAGACTAGACTC
CACAGGTGTAAACGTCCTACTTTGGGGCAACTTGCCAGAGATAGAAGAGAGTACAGATGAAGATGTGTTA
AATATCTCAGCAGAGGAGTGTATTAGATAA

Translation (149 aa):
MPTTTALRWTAAARVRRKGRGGWVPAALRSVSQDGVPGCTVMGGETRSPENAVDFTGRCYFTKICKCKLK
DIACLKCGNIVGYHVIVPCSSCLLSCNNGHFWMFHSQAVYDINRLDSTGVNVLLWGNLPEIEESTDEDVL
NISAEECIR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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