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Report for CCDS41460.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41460.1 Public Homo sapiens 1 FCAMR 24 110 108 CCDS HistoryNCBI Gene:83953Re-query CCDS DB by CCDS ID:41460.1Re-query CCDS DB by GeneID:83953See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41460.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000400962.8 ENSP00000383746.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000400962.8Link to Ensembl Protein Viewer:ENSP00000383746.3Re-query CCDS DB by Nucleotide ID:ENST00000400962Re-query CCDS DB by Protein ID:ENSP00000383746
Original member Current member EBI ENST00000450945.3 ENSP00000392707.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000450945.3Link to Ensembl Protein Viewer:ENSP00000392707.2Re-query CCDS DB by Nucleotide ID:ENST00000450945Re-query CCDS DB by Protein ID:ENSP00000392707
Original member Current member NCBI NM_001122979.3 NP_001116451.1 Accepted alive Link to Nucleotide Sequence:NM_001122979.3Link to Protein Sequence:NP_001116451.1Re-query CCDS DB by Nucleotide ID:NM_001122979Re-query CCDS DB by Protein ID:NP_001116451Link to BLAST:NP_001116451.1
Original member Current member NCBI NM_032029.5 NP_114418.2 Accepted alive Link to Nucleotide Sequence:NM_032029.5Link to Protein Sequence:NP_114418.2Re-query CCDS DB by Nucleotide ID:NM_032029Re-query CCDS DB by Protein ID:NP_114418Link to BLAST:NP_114418.2

Chromosomal Locations for CCDS 41460.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 206958650 206958676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206959679 206959797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206962213 206962551 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206965715 206965858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206967052 206967112 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206967583 206967651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 206970087 206970125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (798 nt):
ATGGATGGAGAGGCCACAGTGAAGCCTGGAGAACAAAAGGAAGTGGTGAGGAGAGGAAGAGAAGTGGACT
ACTCCAGGCTCATTGCTGGCACTTTACCACAATCTCACGTCACCAGCAGGAGGGCGGGATGGAAAATGCC
CCTCTTCCTCATACTGTGCCTGCTACAAGGTTCTTCTTTCGCCCTTCCACAAAAAAGACCCCATCCGAGA
TGGCTGTGGGAGGGCTCTCTCCCCTCCAGGACCCATCTCCGGGCCATGGGAACACTCAGGCCTTCCTCGC
CCCTCTGCTGGCGGGAGGAGAGCTCCTTTGCAGCTCCAAATTCATTGAAGGGCTCAAGGCTGGTGTCAGG
GGAGCCTGGAGGAGCTGTCACCATCCAGTGCCATTATGCCCCCTCATCTGTCAACAGGCACCAGAGGAAG
TACTGGTGCCGTCTGGGGCCCCCAAGATGGATCTGCCAGACCATTGTGTCCACCAACCAGTATACTCACC
ATCGCTATCGTGACCGTGTGGCCCTCACAGACTTTCCACAGAGAGGCTTGTTTGTGGTGAGGCTGTCCCA
ACTGTCCCCGGATGACATCGGATGCTACCTCTGCGGCATTGGAAGTGAAAACAACATGCTGTTCTTAAGC
ATGAATCTGACCATCTCTGCAGTACTTTTCCAGAAGATGAAAGCAGCTCTCGGACCCTGGCTCCTGTCTC
TACCATGCTGGCCCTGTTTATGCTTATGGCTCTGGTTCTATTGCAAAGGAAGCTCTGGAGAAGGAGGACC
TCTCAGGAGGCAGAAAGGGTCACCTTAA

Translation (265 aa):
MDGEATVKPGEQKEVVRRGREVDYSRLIAGTLPQSHVTSRRAGWKMPLFLILCLLQGSSFALPQKRPHPR
WLWEGSLPSRTHLRAMGTLRPSSPLCWREESSFAAPNSLKGSRLVSGEPGGAVTIQCHYAPSSVNRHQRK
YWCRLGPPRWICQTIVSTNQYTHHRYRDRVALTDFPQRGLFVVRLSQLSPDDIGCYLCGIGSENNMLFLS
MNLTISAVLFQKMKAALGPWLLSLPCWPCLCLWLWFYCKGSSGEGGPLRRQKGSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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