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Report for CCDS7351.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7351.1 Public Homo sapiens 10 LRMDA 24 110 108 CCDS HistoryNCBI Gene:83938Re-query CCDS DB by CCDS ID:7351.1Re-query CCDS DB by GeneID:83938See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7351.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372499.5 ENSP00000361577.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372499.5Link to Ensembl Protein Viewer:ENSP00000361577.1Re-query CCDS DB by Nucleotide ID:ENST00000372499Re-query CCDS DB by Protein ID:ENSP00000361577
Original member Current member NCBI NM_032024.5 NP_114413.1 Accepted alive Link to Nucleotide Sequence:NM_032024.5Link to Protein Sequence:NP_114413.1Re-query CCDS DB by Nucleotide ID:NM_032024Re-query CCDS DB by Protein ID:NP_114413Link to BLAST:NP_114413.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_114413.1 198 Q9H2I8 198 100% 0 0

Chromosomal Locations for CCDS 7351.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 75782976 75783022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76036008 76036134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76047164 76047303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76058666 76058783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76324401 76324485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 76557209 76557288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (597 nt):
ATGGAAAAGTATTTGTCACTCAGCGGCAATCATTCTTCAAATAAAAGGTCACTGGAAGGACTGAGCGCAT
TCAGGAGCCTGGAGGAACTCATCTTGGACAACAATCAGCTGGGGGACGACCTTGTGTTGCCAGGGTTACC
CAGACTGCATACCTTAACCCTCAACAAGAACCGAATCACTGATTTGGAGAACCTGCTGGATCACTTGGCA
GAAGTGACACCAGCTCTGGAGTACCTCAGTCTGCTGGGCAACGTGGCCTGTCCCAACGAGCTGGTCAGCT
TGGAAAAGGATGAGGAAGACTACAAGAGATACAGATGCTTTGTTCTGTACAAGCTGCCCAACTTGAAATT
TCTGGATGCCCAGAAAGTAACCAGACAAGAACGAGAGGAGGCGTTGGTCAGAGGAGTCTTCATGAAGGTG
GTGAAGCCCAAGGCTTCTAGTGAGGACGTTGCCAGCTCCCCGGAGCGCCACTACACGCCCTTGCCTTCTG
CTTCCAGGGAACTCACCAGTCACCAAGGTGTCCTGGGGAAGTGTCGCTACGTTTACTATGGGAAAAACTC
AGAGGGCAACAGGTTTATCCGAGATGACCAGCTCTGA

Translation (198 aa):
MEKYLSLSGNHSSNKRSLEGLSAFRSLEELILDNNQLGDDLVLPGLPRLHTLTLNKNRITDLENLLDHLA
EVTPALEYLSLLGNVACPNELVSLEKDEEDYKRYRCFVLYKLPNLKFLDAQKVTRQEREEALVRGVFMKV
VKPKASSEDVASSPERHYTPLPSASRELTSHQGVLGKCRYVYYGKNSEGNRFIRDDQL


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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