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Report for CCDS31288.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31288.1 Public Homo sapiens 10 ABLIM1 24 110 108 CCDS HistoryNCBI Gene:3983Re-query CCDS DB by CCDS ID:31288.1Re-query CCDS DB by GeneID:3983See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31288.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000392955.7 ENSP00000376682.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392955.7Link to Ensembl Protein Viewer:ENSP00000376682.4Re-query CCDS DB by Nucleotide ID:ENST00000392955Re-query CCDS DB by Protein ID:ENSP00000376682
Original member Current member NCBI NM_001003407.2 NP_001003407.1 Accepted alive Link to Nucleotide Sequence:NM_001003407.2Link to Protein Sequence:NP_001003407.1Re-query CCDS DB by Nucleotide ID:NM_001003407Re-query CCDS DB by Protein ID:NP_001003407Link to BLAST:NP_001003407.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001003407.1 718 O14639-2 718 100% 0 0

Chromosomal Locations for CCDS 31288.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 114436260 114436373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114437844 114437924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114439176 114439250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114440082 114440089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114441017 114441077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114441722 114441786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114444029 114444134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114445312 114445403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114447880 114448020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114451624 114451671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114453379 114453483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114465698 114465827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114468181 114468216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114472977 114473132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114473879 114473956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114487958 114488016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114491791 114491878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114545005 114545098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114547650 114547776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114571297 114571406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114575416 114575599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114601827 114601961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114684290 114684353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2157 nt):
ATGTTAATGACCTTGGAAATGACTGAGCTCACGGACCCTCATCACACCATGGGAGACTACAAAGTGGCCC
ACCCTCAGGACCCTCACCACCCATCAGAGAAGCCTGTCATTCACTGCCATAAATGTGGGGAGCCTTGCAA
GGGTGAAGTGCTTCGGGTCCAGACCAAACATTTCCACATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGT
GACCTGGCACAAGGGGGCTTCTTCATAAAGAACGGAGAGTATCTCTGCACCCTGGACTACCAGCGGATGT
ACGGGACACGCTGCCATGGCTGTGGGGAGTTCGTGGAGGGCGAAGTGGTGACTGCTCTGGGCAAGACCTA
CCATCCCAATTGCTTTGCTTGTACTATCTGCAAGCGCCCGTTTCCACCCGGAGACCGAGTCACATTCAAT
GGGAGAGACTGCCTTTGTCAACTCTGTGCACAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTCTCCA
GCAATTGTGCCGGCTGCGGAAGAGATATCAAGAATGGGCAGGCGCTGCTGGCGCTGGATAAGCAGTGGCA
CTTGGGGTGCTTTAAATGCAAGTCCTGCGGGAAGGTCCTCACCGGGGAGTACATCAGCAAGGATGGTGCT
CCGTACTGTGAAAAGGACTACCAGGGACTCTTTGGGGTGAAATGTGAGGCGTGTCACCAGTTTATCACAG
GGAAAGTCCTGGAGGCAGGTGACAAACATTACCACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGAT
GTTCACAGAAGGAGAGGAAATGTATCTTCAAGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACG
AAGACCGAGGAAAAGCTGCGGCCTACCAGGACATCCTCGGAAAGTATTTATTCTAGGCCAGGCTCCAGTA
TTCCTGGCTCACCAGGTCATACTATCTATGCAAAAGTAGACAATGAGATCCTGGATTACAAGGATTTAGC
AGCCATTCCGAAGGTCAAGGCAATTTATGACATTGAACGTCCAGATCTTATTACCTATGAGCCTTTCTAC
ACTTCGGGCTATGATGACAAACAGGAGAGACAGAGCCTTGGAGAGTCTCCGAGGACTTTGTCTCCTACTC
CATCAGCAGAAGGGTACCAGGATGTTCGGGATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAA
CTCCCCTGTGTACAGCCGCCACAGCTACACTCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCT
GGCAATGAGCCGTCCAGCGGCCGGAACTCCCCTCTCCCTTACCGGCCAGACAGCCGCCCTCTAACTCCAA
CTTACGCTCAGGCCCCTAAACATTTCCATGTTCCAGATCAAGGAATCAACATTTACCGAAAGCCACCCAT
CTACAAACAGCATGCTGCCTTGGCAGCCCAGAGCAAGTCCTCAGAAGATATCATCAAGTTTTCCAAGTTC
CCAGCAGCCCAGGCACCAGACCCCAGCGAGACACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCCCT
CATTTGCTGTCGTAGGACCTGACATGAAACGCAGATCTAGTGGCAGAGAGGAAGATGATGAGGAACTTCT
GAGACGTCGGCAGCTTCAAGAAGAGCAATTAATGAAGCTTAACTCAGGCCTGGGACAGTTGATCTTGAAA
GAAGAGATGGAGAAAGAGAGCCGGGAAAGGTCATCTCTGTTAGCCAGTCGCTACGATTCTCCCATCAACT
CAGCTTCACATATTCCATCATCTAAAACTGCATCTCTCCCTGGCTATGGAAGAAATGGGCTTCACCGGCC
TGTTTCTACCGACTTCGCTCAGTATAACAGCTATGGGGATGTCAGCGGGGGAGTGCGAGATTACCAGACA
CTCCCAGATGGCCACATGCCTGCAATGAGAATGGACCGAGGAGTGTCTATGCCCAACATGTTGGAACCAA
AGATATTTCCATATGAAATGCTCATGGTGACCAACAGAGGGCGAAACAAAATCCTCAGAGAGGTGGACAG
AACCAGGCTGGAGCGCCACTTAGCCCCTGAAGTGTTTCGGGAAATCTTTGGAATGTCCATACAGGAGTTT
GACAGGTTACCTCTTTGGAGACGCAACGACATGAAGAAAAAAGCAAAACTCTTCTAA

Translation (718 aa):
MLMTLEMTELTDPHHTMGDYKVAHPQDPHHPSEKPVIHCHKCGEPCKGEVLRVQTKHFHIKCFTCKVCGC
DLAQGGFFIKNGEYLCTLDYQRMYGTRCHGCGEFVEGEVVTALGKTYHPNCFACTICKRPFPPGDRVTFN
GRDCLCQLCAQPMSSSPKETTFSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGA
PYCEKDYQGLFGVKCEACHQFITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDCKQST
KTEEKLRPTRTSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFY
TSGYDDKQERQSLGESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQHFHRP
GNEPSSGRNSPLPYRPDSRPLTPTYAQAPKHFHVPDQGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKF
PAAQAPDPSETPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLILK
EEMEKESRERSSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQT
LPDGHMPAMRMDRGVSMPNMLEPKIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREIFGMSIQEF
DRLPLWRRNDMKKKAKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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