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Report for CCDS7665.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7665.1 Public Homo sapiens 10 DPYSL4 24 110 108 CCDS HistoryNCBI Gene:10570Re-query CCDS DB by CCDS ID:7665.1Re-query CCDS DB by GeneID:10570See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7665.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000338492.9 ENSP00000339850.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000338492.9Link to Ensembl Protein Viewer:ENSP00000339850.3Re-query CCDS DB by Nucleotide ID:ENST00000338492Re-query CCDS DB by Protein ID:ENSP00000339850
Original member Current member NCBI NM_006426.3 NP_006417.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006426.3Link to Protein Sequence:NP_006417.2Re-query CCDS DB by Nucleotide ID:NM_006426Re-query CCDS DB by Protein ID:NP_006417Link to BLAST:NP_006417.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006417.2 572 O14531 572 100% 0 0

Chromosomal Locations for CCDS 7665.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 132187064 132187102 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132190747 132190835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132192658 132192842 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132194845 132195009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132196861 132196922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132197021 132197101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132198415 132198483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132198851 132198971 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132200356 132200512 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132200842 132200983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132201946 132202116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132202646 132202825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132203762 132203927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 132204839 132204930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1719 nt):
ATGTCCTTCCAGGGCAAGAAAAGCATCCCCCGGATCACGAGTGACCGCCTTCTGATCAGAGGTGGGAGGA
TCGTGAATGACGACCAGTCCTTTTACGCTGATGTGCACGTGGAAGATGGCTTGATAAAACAAATCGGAGA
AAACCTCATCGTCCCTGGGGGCATCAAGACCATTGACGCCCACGGCCTGATGGTCCTTCCTGGTGGCGTT
GACGTCCACACAAGGCTGCAGATGCCTGTCCTGGGCATGACACCGGCTGACGACTTCTGTCAGGGCACCA
AGGCAGCGCTAGCAGGAGGAACCACCATGATCTTGGACCACGTCTTCCCCGACACGGGTGTGAGCCTGCT
GGCGGCCTACGAGCAGTGGCGGGAGCGGGCGGACAGCGCGGCCTGCTGCGACTACTCCCTGCACGTGGAC
ATCACCCGATGGCATGAGAGCATCAAGGAGGAGCTGGAGGCCCTGGTCAAGGAGAAGGGTGTGAACTCCT
TCCTGGTCTTCATGGCATACAAGGACCGGTGCCAGTGCAGCGACAGCCAGATGTACGAGATCTTCAGCAT
CATCCGGGACCTGGGGGCCTTGGCCCAGGTGCACGCTGAGAACGGGGACATCGTGGAGGAGGAGCAGAAG
CGGTTGCTGGAGCTCGGCATCACTGGCCCCGAGGGCCACGTGCTCAGCCACCCCGAGGAGGTGGAGGCTG
AGGCGGTGTACCGAGCTGTCACCATCGCCAAGCAGGCAAACTGCCCGCTGTACGTCACCAAGGTGATGAG
CAAGGGGGCGGCCGACGCCATCGCTCAGGCCAAGCGCAGAGGGGTGGTCGTGTTTGGGGAGCCCATCACC
GCCAGCCTGGGCACCGACGGTTCACACTACTGGAGCAAGAACTGGGCCAAGGCCGCAGCCTTCGTCACAT
CACCCCCTGTCAACCCAGACCCCACCACGGCGGACCACCTCACCTGCTTGCTGTCCAGCGGGGACCTCCA
GGTGACAGGCAGCGCCCACTGCACCTTCACCACTGCCCAGAAGGCTGTGGGCAAGGACAACTTCGCGCTG
ATCCCCGAGGGCACCAACGGCATTGAGGAGCGCATGTCGATGGTCTGGGAGAAATGTGTGGCCTCTGGGA
AGATGGACGAGAATGAGTTCGTCGCGGTGACCAGTACAAATGCTGCCAAAATCTTCAATTTTTACCCAAG
GAAGGGGCGAGTGGCTGTGGGCTCTGACGCTGACCTGGTCATATGGAACCCCAAGGCCACCAAGATCATC
TCTGCCAAGACCCACAATCTGAACGTGGAGTACAACATCTTCGAGGGAGTGGAGTGCCGGGGAGCGCCTG
CCGTGGTCATAAGTCAGGGCCGAGTGGCGCTGGAGGACGGGAAGATGTTTGTCACCCCGGGGGCGGGCCG
CTTCGTCCCTCGGAAAACATTCCCGGACTTTGTCTACAAGAGGATCAAAGCTCGCAACAGGCTGGCGGAG
ATCCACGGTGTGCCCCGTGGACTGTATGACGGGCCCGTCCACGAGGTGATGGTGCCTGCCAAGCCAGGGA
GTGGCGCTCCGGCCCGCGCGTCCTGCCCAGGCAAGATCTCCGTCCCTCCTGTGCGCAACCTACATCAGTC
GGGGTTCAGCCTATCTGGGTCTCAGGCTGATGACCACATCGCCCGACGCACAGCACAGAAGATCATGGCA
CCACCTGGCGGCCGCTCCAACATCACCTCTCTCTCCTAG

Translation (572 aa):
MSFQGKKSIPRITSDRLLIRGGRIVNDDQSFYADVHVEDGLIKQIGENLIVPGGIKTIDAHGLMVLPGGV
DVHTRLQMPVLGMTPADDFCQGTKAALAGGTTMILDHVFPDTGVSLLAAYEQWRERADSAACCDYSLHVD
ITRWHESIKEELEALVKEKGVNSFLVFMAYKDRCQCSDSQMYEIFSIIRDLGALAQVHAENGDIVEEEQK
RLLELGITGPEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYVTKVMSKGAADAIAQAKRRGVVVFGEPIT
ASLGTDGSHYWSKNWAKAAAFVTSPPVNPDPTTADHLTCLLSSGDLQVTGSAHCTFTTAQKAVGKDNFAL
IPEGTNGIEERMSMVWEKCVASGKMDENEFVAVTSTNAAKIFNFYPRKGRVAVGSDADLVIWNPKATKII
SAKTHNLNVEYNIFEGVECRGAPAVVISQGRVALEDGKMFVTPGAGRFVPRKTFPDFVYKRIKARNRLAE
IHGVPRGLYDGPVHEVMVPAKPGSGAPARASCPGKISVPPVRNLHQSGFSLSGSQADDHIARRTAQKIMA
PPGGRSNITSLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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