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Report for CCDS31466.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31466.1 Public Homo sapiens 11 TTC17 24 110 108 CCDS HistoryNCBI Gene:55761Re-query CCDS DB by CCDS ID:31466.1Re-query CCDS DB by GeneID:55761See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31466.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000039989.9 ENSP00000039989.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000039989.9Link to Ensembl Protein Viewer:ENSP00000039989.4Re-query CCDS DB by Nucleotide ID:ENST00000039989Re-query CCDS DB by Protein ID:ENSP00000039989
Original member Current member NCBI NM_018259.6 NP_060729.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018259.6Link to Protein Sequence:NP_060729.2Re-query CCDS DB by Nucleotide ID:NM_018259Re-query CCDS DB by Protein ID:NP_060729Link to BLAST:NP_060729.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060729.2 1141 Q96AE7-1 1141 100% 0 0

Chromosomal Locations for CCDS 31466.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 43358955 43359113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43379233 43379322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43389652 43389821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43391465 43391576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43391821 43391952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43396709 43396818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43397347 43397491 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43397974 43398113 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43399888 43400048 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43401446 43401558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43403998 43404144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43405514 43405629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43405786 43405951 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43407138 43407215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43407353 43407577 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43414590 43414776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43443325 43443584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43444056 43444209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43448002 43448122 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43450082 43450241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43451182 43451265 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43490239 43490358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43492020 43492163 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 43493773 43493904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3426 nt):
ATGGCGGCGGCAGTAGGGGTTCGTGGCCGGTACGAGCTGCCGCCTTGCTCCGGCCCAGGCTGGCTCCTCA
GCCTTTCCGCCTTGCTGAGTGTGGCGGCACGAGGGGCCTTCGCCACCACGCACTGGGTCGTCACGGAGGA
CGGGAAAATCCAGCAGCAGGTGGATTCACCAATGAACTTGAAGCATCCTCATGACCTAGTCATATTAATG
AGACAAGAAGCAACAGTTAACTACCTCAAAGAATTAGAGAAACAATTAGTTGCTCAAAAAATTCACATAG
AAGAGAATGAGGACAGAGACACAGGACTGGAACAGAGACATAATAAAGAAGACCCAGACTGCATCAAAGC
CAAGGTGCCCTTAGGGGACCTGGATCTATATGATGGCACATACATAACTTTGGAGAGCAAAGACATCAGT
CCTGAAGATTATATAGACACAGAATCTCCTGTCCCTCCAGACCCAGAGCAACCTGATTGTACTAAAATTC
TAGAACTTCCATATAGTATACATGCTTTTCAGCACTTGAGAGGTGTACAGGAGAGAGTTAATCTTTCTGC
ACCTCTGCTACCTAAAGAAGACCCAATCTTCACATATTTATCTAAACGGTTAGGAAGGAGTATAGATGAC
ATAGGTCACCTCATTCATGAAGGCCTACAGAAGAACACTTCCTCGTGGGTACTGTATAACATGGCTTCAT
TTTACTGGAGAATTAAGAATGAGCCATATCAGGTAGTAGAATGTGCCATGCGAGCACTTCACTTCTCTTC
CAGGCACAATAAAGACATTGCCCTGGTCAACCTGGCAAACGTTCTACACAGAGCACACTTCTCTGCTGAT
GCTGCTGTCGTGGTCCATGCAGCTCTGGATGACAGTGACTTCTTCACCAGCTATTACACTTTGGGGAATA
TATATGCAATGCTTGGGGAATATAACCACTCAGTGCTCTGTTATGACCACGCTTTGCAGGCCAGACCTGG
GTTTGAGCAAGCTATAAAGAGGAAGCATGCTGTCCTATGTCAGCAAAAACTGGAGCAGAAATTGGAGGCT
CAGCATAGATCTCTCCAGCGAACACTGAATGAGTTAAAAGAGTATCAAAAGCAGCATGACCACTACCTGA
GACAGCAGGAAATCCTAGAAAAACATAAACTGATTCAGGAGGAGCAAATCTTAAGAAATATCATTCATGA
GACTCAGATGGCAAAAGAGGCACAATTAGGAAATCATCAGATATGCCGACTGGTCAACCAGCAGCATAGT
TTACATTGCCAGTGGGACCAGCCTGTACGCTATCATCGTGGAGATATCTTTGAAAATGTGGACTATGTTC
AGTTTGGTGAGGATTCATCAACCTCCAGTATGATGTCTGTGAACTTTGATGTTCAATCAAATCAGAGTGA
TATCAATGATTCGGTCAAGTCTTCTCCCGTAGCCCATTCTATTCTCTGGATTTGGGGCAGGGACTCTGAT
GCATATAGGGACAAACAGCATATTCTATGGCCTAAAAGAGCAGATTGTACAGAAAGCTACCCTAGAGTCC
CTGTTGGTGGGGAATTGCCAACGTATTTTCTGCCTCCGGAAAACAAAGGACTCAGGATCCACGAACTCAG
CAGTGATGATTATTCTACAGAAGAAGAGGCCCAAACCCCTGACTGTTCCATAACTGACTTCAGAAAAAGC
CACACTCTGTCCTACTTAGTCAAAGAATTAGAGGTTCGCATGGATCTGAAAGCCAAAATGCCAGATGACC
ATGCACGAAAAATTTTGCTTTCCCGTATTAATAACTATACTATCCCAGAAGAAGAAATTGGGTCTTTCTT
ATTTCATGCTATTAATAAGCCAAATGCTCCTATCTGGCTCATACTCAATGAAGCTGGACTATACTGGAGA
GCAGTAGGAAATAGCACTTTTGCTATTGCCTGTCTTCAGAGGGCTTTGAATTTAGCTCCACTTCAATACC
AAGATGTTCCTCTTGTCAACTTGGCCAACCTTTTGATTCATTACGGCCTTCATCTTGATGCCACTAAGCT
GCTACTTCAAGCTTTGGCCATCAATAGCTCTGAGCCTCTGACCTTTTTGAGCCTGGGAAATGCTTACCTT
GCTCTGAAGAATATCAGTGGGGCACTTGAGGCCTTTAGACAGGCCTTGAAATTAACCACCAAATGTCCAG
AGTGTGAAAACAGCCTGAAGTTGATCCGCTGTATGCAGTTTTATCCTTTTCTGTACAACATCACTTCTTC
TGTTTGCAGTGGTACGGTGGTTGAGGAGAGCAATGGTTCTGATGAGATGGAGAATTCAGATGAAACCAAA
ATGTCAGAAGAAATACTGGCTTTGGTGGATGAATTTCAACAGGCATGGCCTTTGGAAGGCTTTGGGGGTG
CACTAGAGATGAAAGGGCGGCGTCTAGACTTACAAGGAATACGGGTGCTGAAGAAAGGTCCCCAGGATGG
AGTGGCCAGAAGCTCTTGCTATGGAGACTGCAGAAGTGAAGATGATGAAGCAACAGAATGGATTACATTC
CAGGTCAAACGTGTAAAGAAACCCAAAGGAGATCATAAGAAAACTCCTGGGAAAAAAGTAGAAACAGGTC
AGATAGAAAATGGACATCGTTACCAAGCAAACCTAGAGATCACTGGCCCCAAGGTGGCATCTCCTGGGCC
ACAAGGAAAAAAACGTGACTACCAGCGTCTGGGATGGCCCAGCCCGGACGAATGCCTCAAACTCCGCTGG
GTAGAGCTGACTGCCATCGTGAGTACCTGGCTTGCAGTTTCTTCAAAAAACATTGACATCACAGAACACA
TAGATTTTGCCACCCCTATACAGCAGCCAGCAATGGAGCCTCTTTGCAATGGCAATCTCCCCACGAGTAT
GCATACCCTGGACCACTTGCATGGGGTTTCCAACCGAGCCAGCCTGCACTACACAGGGGAGAGTCAGTTA
ACAGAGGTATTACAAAATCTCGGCAAAGACCAATATCCACAACAGTCGCTTGAACAGATTGGCACCCGAA
TTGCCAAAGTTTTGGAAAAGAACCAGACGTCCTGGGTCCTCTCCAGCATGGCAGCCCTCTACTGGAGGGT
GAAAGGCCAAGGAAAGAAGGCAATCGACTGCCTCCGCCAGGCTCTGCACTATGCGCCACACCAGATGAAG
GATGTGCCCCTGATTAGCCTGGCCAACATCTTGCACAATGCCAAGCTCTGGAATGACGCCGTCATAGTAG
CCACCATGGCAGTAGAGATCGCACCACACTTTGCTGTGAACCACTTCACTCTGGGCAATGTCTACGTGGC
AATGGAAGAATTTGAAAAAGCACTGGTGTGGTATGAATCCACATTGAAGCTTCAGCCCGAGTTTGTCCCA
GCCAAGAACCGAATCCAGACCATCCAGTGTCACTTAATGCTGAAGAAGGGACGGCGCTCTCCTTAG

Translation (1141 aa):
MAAAVGVRGRYELPPCSGPGWLLSLSALLSVAARGAFATTHWVVTEDGKIQQQVDSPMNLKHPHDLVILM
RQEATVNYLKELEKQLVAQKIHIEENEDRDTGLEQRHNKEDPDCIKAKVPLGDLDLYDGTYITLESKDIS
PEDYIDTESPVPPDPEQPDCTKILELPYSIHAFQHLRGVQERVNLSAPLLPKEDPIFTYLSKRLGRSIDD
IGHLIHEGLQKNTSSWVLYNMASFYWRIKNEPYQVVECAMRALHFSSRHNKDIALVNLANVLHRAHFSAD
AAVVVHAALDDSDFFTSYYTLGNIYAMLGEYNHSVLCYDHALQARPGFEQAIKRKHAVLCQQKLEQKLEA
QHRSLQRTLNELKEYQKQHDHYLRQQEILEKHKLIQEEQILRNIIHETQMAKEAQLGNHQICRLVNQQHS
LHCQWDQPVRYHRGDIFENVDYVQFGEDSSTSSMMSVNFDVQSNQSDINDSVKSSPVAHSILWIWGRDSD
AYRDKQHILWPKRADCTESYPRVPVGGELPTYFLPPENKGLRIHELSSDDYSTEEEAQTPDCSITDFRKS
HTLSYLVKELEVRMDLKAKMPDDHARKILLSRINNYTIPEEEIGSFLFHAINKPNAPIWLILNEAGLYWR
AVGNSTFAIACLQRALNLAPLQYQDVPLVNLANLLIHYGLHLDATKLLLQALAINSSEPLTFLSLGNAYL
ALKNISGALEAFRQALKLTTKCPECENSLKLIRCMQFYPFLYNITSSVCSGTVVEESNGSDEMENSDETK
MSEEILALVDEFQQAWPLEGFGGALEMKGRRLDLQGIRVLKKGPQDGVARSSCYGDCRSEDDEATEWITF
QVKRVKKPKGDHKKTPGKKVETGQIENGHRYQANLEITGPKVASPGPQGKKRDYQRLGWPSPDECLKLRW
VELTAIVSTWLAVSSKNIDITEHIDFATPIQQPAMEPLCNGNLPTSMHTLDHLHGVSNRASLHYTGESQL
TEVLQNLGKDQYPQQSLEQIGTRIAKVLEKNQTSWVLSSMAALYWRVKGQGKKAIDCLRQALHYAPHQMK
DVPLISLANILHNAKLWNDAVIVATMAVEIAPHFAVNHFTLGNVYVAMEEFEKALVWYESTLKLQPEFVP
AKNRIQTIQCHLMLKKGRRSP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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