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Report for CCDS44737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
44737.1 Public Homo sapiens 11 NXPE4 24 110 108 CCDS HistoryNCBI Gene:54827Re-query CCDS DB by CCDS ID:44737.1Re-query CCDS DB by GeneID:54827See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 44737.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000424261.6 ENSP00000401503.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000424261.6Link to Ensembl Protein Viewer:ENSP00000401503.2Re-query CCDS DB by Nucleotide ID:ENST00000424261Re-query CCDS DB by Protein ID:ENSP00000401503
Original member Current member NCBI NM_017678.3 NP_060148.2 Accepted alive Link to Nucleotide Sequence:NM_017678.3Link to Protein Sequence:NP_060148.2Re-query CCDS DB by Nucleotide ID:NM_017678Re-query CCDS DB by Protein ID:NP_060148Link to BLAST:NP_060148.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060148.2 260 Q6UWF7-2 260 100% 0 0

Chromosomal Locations for CCDS 44737.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 114570938 114571473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114580132 114580338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 114581725 114581764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (783 nt):
ATGGAAAAATTCAATACAATTAGTGTCTCCAAATGCAACAAAGAAACAGTTGCAATGAAAGAGAAATGCA
AGTTTGGAATGACATCCACAATCCCCAGTGGGCATGTCTGGAGAAACACATGGAATCCTGTCTCCTGTAG
TTTGGCTACAGTCAAAATGAAGGAATGCCTGAGAGGAAAACTCATATACCTAATGGGAGATTCCACGATC
CGCCAGTGGATGGAATACTTCAAAGCCAGTATCAACACACTGAAGTCAGTGGATCTGCATGAATCTGGAA
AATTGCAACACCAGCTTGCTGTGGATTTGGATAGGAACATCAACATCCAGTGGCAAAAATATTGTTATCC
CTTGATAGGATCAATGACCTATTCAGTCAAAGAGATGGAGTACCTCACCCGGGCCATTGACAGAACTGGA
GGAGAAAAAAATACTGTCATTGTTATTTCCCTGGGCCAGCATTTCAGACCCTTTCCCATTGATGTTTTTA
TCCGAAGGGCCCTCAATGTCCACAAAGCCATTCAGCATCTTCTTCTGAGAAGCCCAGACACTATGGTTAT
CATCAAAACAGAAAACATCAGGGAGATGTACAATGATGCAGAAAGATTTAGTGACTTTCATGGTTACATT
CAATATCTCATCATAAAGGACATTTTCCAGGATCTCAGTGTGAGTATCATTGATGCCTGGGATATAACAA
TTGCATATGGCACAAATAATGTACACCCACCTCAACATGTAGTCGGAAATCAGATTAATATATTATTAAA
CTATATTTGTTAA

Translation (260 aa):
MEKFNTISVSKCNKETVAMKEKCKFGMTSTIPSGHVWRNTWNPVSCSLATVKMKECLRGKLIYLMGDSTI
RQWMEYFKASINTLKSVDLHESGKLQHQLAVDLDRNINIQWQKYCYPLIGSMTYSVKEMEYLTRAIDRTG
GEKNTVIVISLGQHFRPFPIDVFIRRALNVHKAIQHLLLRSPDTMVIIKTENIREMYNDAERFSDFHGYI
QYLIIKDIFQDLSVSIIDAWDITIAYGTNNVHPPQHVVGNQINILLNYIC


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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