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Report for CCDS76528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
76528.1 Public Homo sapiens 12 CLEC1A 24 110 108 CCDS HistoryNCBI Gene:51267Re-query CCDS DB by CCDS ID:76528.1Re-query CCDS DB by GeneID:51267See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 76528.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000420265.2 ENSP00000417010.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000420265.2Link to Ensembl Protein Viewer:ENSP00000417010.2Re-query CCDS DB by Nucleotide ID:ENST00000420265Re-query CCDS DB by Protein ID:ENSP00000417010
Original member Current member NCBI NM_001297749.2 NP_001284678.1 Accepted alive Link to Nucleotide Sequence:NM_001297749.2Link to Protein Sequence:NP_001284678.1Re-query CCDS DB by Nucleotide ID:NM_001297749Re-query CCDS DB by Protein ID:NP_001284678Link to BLAST:NP_001284678.1

Chromosomal Locations for CCDS 76528.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10071333 10071513 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10073293 10073411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10075504 10075655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10098808 10098922 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (567 nt):
ATGCAGGCCAAGTACAGCAGCACGAGGGACATGCTGGATGATGATGGGGACACCACCATGAGCCTGCATT
CTCAAGGCTCTGCCACAACTCGGCATCCAGAGCCCCGGCGCACAGCACACAGGTGCAGCCCTTGTACAGA
ACAATGGAAATGGCATGGAGACAATTGCTACCAGTTCTATAAAGACAGCAAAAGTTGGGAGGACTGTAAA
TATTTCTGCCTTAGTGAAAACTCTACCATGCTGAAGATAAACAAACAAGAAGACCTGGAATTTGCCGCGT
CTCAGAGCTACTCTGAGTTTTTCTACTCTTATTGGACAGGGCTTTTGCGCCCTGACAGTGGCAAGGCCTG
GCTGTGGATGGATGGAACCCCTTTCACTTCTGAACTGTTCCATATTATAATAGATGTCACCAGCCCAAGA
AGCAGAGACTGTGTGGCCATCCTTAATGGGATGATCTTCTCAAAGGACTGCAAAGAATTGAAGCGTTGTG
TCTGTGAGAGAAGGGCAGGAATGGTGAAGCCAGAGAGCCTCCATGTCCCCCCTGAAACATTAGGCGAAGG
TGACTGA

Translation (188 aa):
MQAKYSSTRDMLDDDGDTTMSLHSQGSATTRHPEPRRTAHRCSPCTEQWKWHGDNCYQFYKDSKSWEDCK
YFCLSENSTMLKINKQEDLEFAASQSYSEFFYSYWTGLLRPDSGKAWLWMDGTPFTSELFHIIIDVTSPR
SRDCVAILNGMIFSKDCKELKRCVCERRAGMVKPESLHVPPETLGEGD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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