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Report for CCDS10047.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10047.2 Public Homo sapiens 15 FAM98B 24 110 108 CCDS HistoryNCBI Gene:283742Re-query CCDS DB by CCDS ID:10047.2Re-query CCDS DB by GeneID:283742See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10047.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397609.6 ENSP00000380734.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397609.6Link to Ensembl Protein Viewer:ENSP00000380734.2Re-query CCDS DB by Nucleotide ID:ENST00000397609Re-query CCDS DB by Protein ID:ENSP00000380734
Original member Current member NCBI NM_173611.4 NP_775882.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173611.4Link to Protein Sequence:NP_775882.2Re-query CCDS DB by Nucleotide ID:NM_173611Re-query CCDS DB by Protein ID:NP_775882Link to BLAST:NP_775882.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775882.2 433 Q52LJ0-2 433 100% 0 0

Chromosomal Locations for CCDS 10047.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 38454162 38454232 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38464032 38464177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38465269 38465403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38470227 38470405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38473505 38473585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38474182 38474298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38481292 38481459 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 38484255 38484659 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1302 nt):
ATGAGAGGGCCGGAGCCGGGTCCCCAACCGACGATGGAGGGAGACGTGCTGGACACACTGGAGGCGCTGG
GGTATAAAGGACCATTGTTAGAAGAGCAAGCCCTTACAAAGGCGGCAGAGGGTGGATTATCTTCACCTGA
ATTTTCAGAGCTCTGTATTTGGTTAGGCTCTCAAATAAAATCATTATGCAACTTGGAAGAAAGTATCACG
TCTGCTGGAAGAGATGATCTAGAGAGCTTCCAGCTTGAGATAAGTGGCTTTTTAAAAGAAATGGCATGTC
CATATTCTGTACTCATATCAGGAGATATTAAAGATCGTTTAAAAAAGAAGGAGGACTGTTTGAAACTTCT
ATTATTTTTAAGTACAGAACTTCAAGCTTCACAGATATTACAGAACAAGAAACATAAAAATTCTCAATTA
GATAAAAATAGTGAAGTTTATCAGGAAGTTCAAGCTATGTTTGATACACTTGGTATACCCAAGTCAACAA
CTTCTGACATTCCGCATATGCTAAACCAAGTGGAATCAAAGGTGAAAGATATTCTCTCAAAGGTCCAGAA
AAATCATGTGGGAAAACCACTGCTGAAAATGGATTTAAATTCAGAACAGGCGGAACAACTGGAAAGAATC
AATGATGCTCTTTCCTGTGAATATGAGTGCCGCCGACGAATGTTAATGAAACGATTAGATGTGACTGTAC
AGTCCTTTGGATGGTCTGATAGAGCAAAGGTAAAAACAGATGATATAGCAAGAATTTATCAGCCTAAGCG
TTATGCTTTGTCACCCAAGACAACGATTACAATGGCACATCTACTTGCTGCTCGTGAAGATCTATCCAAG
ATCATTAGGACAAGTAGTGGCACCAGCCGGGAGAAGACCGCATGTGCCATTAATAAGGTGCTGATGGGAA
GGGTGCCTGACAGGGGAGGCCGGCCGAATGAAATTGAACCACCACCTCCAGAAATGCCCCCTTGGCAAAA
GAGACAAGAAGGCGGCGGTGGAAGGGGTGGTTGGGGTGGTGGTGGTGGAGGTGGTGGTAGAGGAGGTGGT
GGGGGTGGGGGTGGGAGAGGTGGCTGGGGGGGTGGAGGAGGAGGTTGGGGAGGTGGTGGGGGAGGGGGAG
GAGGGTGGGGGGGAGGAGGAGGAGGTGGTAGAGGAGGTTTCCAAGGCAGGGGAGATTATGGTGGAAGAGG
GGGTTATGGTGGAAGAGGGGGCTATGGTGGAAGAGGCTATGGAGATCCATATGGAGGAGGTGGTGGTGGT
GGTGGTGGTGGTGGTGGAGGAGGTGGATATAGAAGATACTAA

Translation (433 aa):
MRGPEPGPQPTMEGDVLDTLEALGYKGPLLEEQALTKAAEGGLSSPEFSELCIWLGSQIKSLCNLEESIT
SAGRDDLESFQLEISGFLKEMACPYSVLISGDIKDRLKKKEDCLKLLLFLSTELQASQILQNKKHKNSQL
DKNSEVYQEVQAMFDTLGIPKSTTSDIPHMLNQVESKVKDILSKVQKNHVGKPLLKMDLNSEQAEQLERI
NDALSCEYECRRRMLMKRLDVTVQSFGWSDRAKVKTDDIARIYQPKRYALSPKTTITMAHLLAAREDLSK
IIRTSSGTSREKTACAINKVLMGRVPDRGGRPNEIEPPPPEMPPWQKRQEGGGGRGGWGGGGGGGGRGGG
GGGGGRGGWGGGGGGWGGGGGGGGGWGGGGGGGRGGFQGRGDYGGRGGYGGRGGYGGRGYGDPYGGGGGG
GGGGGGGGGYRRY


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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