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Report for CCDS45269.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45269.1 Public Homo sapiens 15 FAM81A 24 110 108 CCDS HistoryNCBI Gene:145773Re-query CCDS DB by CCDS ID:45269.1Re-query CCDS DB by GeneID:145773See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45269.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000288228.10 ENSP00000288228.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000288228.10Link to Ensembl Protein Viewer:ENSP00000288228.5Re-query CCDS DB by Nucleotide ID:ENST00000288228Re-query CCDS DB by Protein ID:ENSP00000288228
Original member Current member NCBI NM_152450.3 NP_689663.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152450.3Link to Protein Sequence:NP_689663.2Re-query CCDS DB by Nucleotide ID:NM_152450Re-query CCDS DB by Protein ID:NP_689663Link to BLAST:NP_689663.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689663.2 368 Q8TBF8 368 100% 0 0

Chromosomal Locations for CCDS 45269.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 59458627 59458646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59459933 59460206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59492271 59492389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59507213 59507342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59508863 59508969 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59514289 59514424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59516645 59516840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 59521254 59521378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1107 nt):
ATGGAAAATATGCATCTAAGGCGAGTGAGAACCATGCCCCGACACAGCCAGTCCCTGACCATGGCACCAT
ACTCATCTGTAAGCCTCGTGGAGCAGCTGGAAGACAGGATCCTCTGCCATGAGAAAACCACCGCCGCCCT
CGTAGAGCACGCCTTTCGGATTAAAGATGACATTGTCAACAGTTTGCAGAAAATGCAAAACAAAGGGGGA
GGTGACCGCTTGGCCAGGCTTTTCTTGGAGGAGCATATCAGAAACATAACTGCCATAGTGAAGCAACTTA
ATCGGGATATCGAGGTACTCCAGGAGCAGATTCGTGCCCGGGACAACATTAGCTATGGAACTAATTCTGC
CTTAAAGACCCTGGAGATGCGCCAGCTCTCCGGTTTGGGAGATCTTCGAGGAAGAGTGGCAAGATGTGAT
GCCAGCATAGCTAGACTTTCTGCAGAGCACAAAACGACCTATGAGGGGCTCCAGCACTTGAACAAAGAAC
AGCAGGCTGCCAAACTTATCTTGGAAACGAAAATCAAAGATGCAGAGGGACAGATTTCTCAGCTTTTGAA
CAGAGTGGACTTGTCAATATCAGAGCAGAGCACCAAACTGAAGATGTCTCACAGAGACAGTAACCACCAG
CTTCAGCTTTTGGACACTAAATTTAAAGGTACAGTTGAGGAACTCAGTAACCAGATATTATCTGCACGGA
GTTGGTTGCAACAGGAACAAGAACGGATAGAAAAAGAGCTTTTACAGAAAATTGATCAGCTTTCCTTGAT
TGTTAAGGAAAACAGTGGAGCCAGTGAAAGGGATATGGAGAAGAAGCTCAGCCAGATGTCAGCCAGGCTT
GACAAAATAGAAGAGGGTCAAAAGAAGACTTTTGATGGTCAGAGAACAAGGCAAGAAGAGGAGAAGATGC
ACGGGCGAATCACCAAGCTGGAGTTACAGATGAACCAGAACATCAAGGAAATGAAAGCAGAAGTTAATGC
TGGGTTTACAGCCGTCTATGAAAGCATAGGATCCCTCAGGCAAGTTCTCGAGGCCAAGATGAAGCTGGAC
AGGGACCAGCTACAGAAGCAAATCCAGCTGATGCAGAAGCCAGAGACCCCCATGTGA

Translation (368 aa):
MENMHLRRVRTMPRHSQSLTMAPYSSVSLVEQLEDRILCHEKTTAALVEHAFRIKDDIVNSLQKMQNKGG
GDRLARLFLEEHIRNITAIVKQLNRDIEVLQEQIRARDNISYGTNSALKTLEMRQLSGLGDLRGRVARCD
ASIARLSAEHKTTYEGLQHLNKEQQAAKLILETKIKDAEGQISQLLNRVDLSISEQSTKLKMSHRDSNHQ
LQLLDTKFKGTVEELSNQILSARSWLQQEQERIEKELLQKIDQLSLIVKENSGASERDMEKKLSQMSARL
DKIEEGQKKTFDGQRTRQEEEKMHGRITKLELQMNQNIKEMKAEVNAGFTAVYESIGSLRQVLEAKMKLD
RDQLQKQIQLMQKPETPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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