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Report for CCDS10235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10235.1 Public Homo sapiens 15 UACA 24 110 108 CCDS HistoryNCBI Gene:55075Re-query CCDS DB by CCDS ID:10235.1Re-query CCDS DB by GeneID:55075See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000322954.11 ENSP00000314556.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000322954.11Link to Ensembl Protein Viewer:ENSP00000314556.6Re-query CCDS DB by Nucleotide ID:ENST00000322954Re-query CCDS DB by Protein ID:ENSP00000314556
Original member Current member NCBI NM_018003.4 NP_060473.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018003.4Link to Protein Sequence:NP_060473.2Re-query CCDS DB by Nucleotide ID:NM_018003Re-query CCDS DB by Protein ID:NP_060473Link to BLAST:NP_060473.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060473.2 1416 Q9BZF9-1 1416 100% 0 0

Chromosomal Locations for CCDS 10235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 70657056 70657127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70660151 70660216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70664662 70664814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70666724 70669462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70671039 70671091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70671965 70672001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70676493 70676591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70677108 70677140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70678099 70678206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70679608 70679676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70682758 70682795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70684265 70684446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70687540 70687646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70687750 70687820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70690454 70690511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70691299 70691363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70695017 70695105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70699527 70699660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 70763330 70763407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4251 nt):
ATGAAGAGCCTCAAGTCCCGCCTGAGGAGGCAGGACGTGCCCGGCCCCGCGTCGTCTGGCGCCGCCGCCG
CCAGCGCGCATGCAGCAGATTGGAATAAATATGATGACCGATTGATGAAAGCAGCAGAAAGGGGGGATGT
AGAAAAAGTGACCTCAATCCTTGCTAAAAAGGGGGTCAATCCAGGCAAACTAGATGTGGAAGGCAGATCT
GTCTTCCATGTTGTGACCTCAAAGGGGAATCTTGAGTGTTTGAATGCCATCCTTATACATGGAGTTGATA
TTACAACCAGTGACACTGCAGGGAGAAATGCTCTTCACCTGGCTGCTAAGTATGGACATGCATTGTGCCT
ACAAAAACTTCTACAGTACAATTGTCCCACTGAGCATGCAGACCTGCAGGGAAGAACTGCACTTCACGAT
GCCGCAATGGCAGATTGTCCTTCTAGCATACAGCTGCTTTGTGACCATGGGGCCTCTGTGAATGCCAAAG
ATGTAGACGGGCGGACACCACTTGTTCTGGCTACTCAGATGAGTAGGCCAACAATATGTCAACTGCTGAT
AGATAGAGGAGCGGATGTTAATTCCAGAGACAAACAAAACAGAACTGCCCTCATGCTAGGTTGCGAATAT
GGTTGCAGAGATGCAGTAGAAGTCTTAATTAAAAATGGTGCTGATATAAGCTTGCTGGATGCGCTTGGCC
ATGATAGTTCTTACTATGCAAGAATTGGTGACAATCTGGACATTCTAACCTTGTTGAAGACTGCATCGGA
AAATACCAACAAAGGGAGAGAACTTTGGAAGAAAGGGCCATCTTTGCAACAGCGAAATTTGACACACATG
CAAGATGAAGTAAATGTGAAGTCACATCAGAGGGAGCATCAAAATATTCAGGATTTGGAGATTGAAAATG
AAGATTTGAAAGAGAGGTTGAGAAAAATTCAGCAAGAACAAAGAATACTTTTGGATAAAGTCAATGGTTT
ACAGTTACAGCTGAATGAGGAAGTTATGGTTGCTGATGATCTGGAAAGCGAGAGAGAAAAGCTGAAGTCC
CTTTTGGCAGCTAAAGAAAAGCAACATGAAGAAAGCTTAAGGACTATTGAGGCTCTGAAAAATAGATTTA
AATATTTTGAGAGTGATCATTTAGGATCAGGAAGTCATTTCAGTAACCGAAAAGAAGATATGCTTCTTAA
ACAAGGTCAGATGTATATGGCAGACTCACAGTGTACTTCCCCAGGTATACCAGCCCATATGCAAAGCAGA
TCTATGTTAAGACCTCTGGAACTATCTTTACCCAGTCAAACGTCATACTCTGAAAATGAAATTTTAAAGA
AAGAGTTAGAAGCAATGCGAACTTTCTGTGAGTCAGCAAAACAAGACCGACTGAAGCTCCAAAATGAACT
GGCACACAAAGTGGCAGAATGCAAAGCTTTAGCATTAGAATGTGAAAGGGTCAAGGAGGATTCAGATGAA
CAGATAAAGCAATTAGAAGATGCATTAAAAGATGTGCAGAAGAGGATGTATGAGTCAGAAGGTAAAGTTA
AACAAATGCAGACCCATTTTCTTGCCCTTAAAGAACACTTAACAAGTGAAGCAGCCTCAGGGAATCACAG
ACTAACCGAGGAACTGAAGGATCAGTTGAAAGACTTGAAAGTAAAATATGAAGGTGCTTCAGCAGAAGTG
GGGAAATTAAGAAACCAAATCAAACAAAATGAGATGATAGTAGAAGAGTTTAAGAGGGATGAAGGCAAGC
TGATAGAAGAAAATAAGCGATTACAGAAGGAACTTAGTATGTGTGAAATGGAGCGAGAGAAGAAAGGAAG
AAAGGTCACAGAGATGGAAGGCCAGGCAAAAGAATTGTCAGCGAAGTTGGCCCTTTCCATTCCAGCTGAA
AAATTTGAAAACATGAAGAGCTCATTATCAAATGAAGTGAATGAGAAAGCAAAAAAATTAGTAGAAATGG
AAAGAGAACATGAAAAATCACTTAGTGAAATTAGACAGTTAAAGAGAGAACTTGAGAATGTTAAGGCCAA
GCTTGCTCAGCACGTCAAACCAGAGGAACATGAACAGGTTAAGAGCAGATTAGAACAGAAATCAGGAGAA
CTTGGGAAGAAGATCACTGAGTTAACATTGAAAAATCAGACACTACAAAAGGAAATTGAAAAAGTTTATT
TGGATAATAAGCTCCTCAAGGAGCAAGCACATAACTTAACAATTGAAATGAAAAATCATTATGTTCCTTT
AAAAGTAAGTGAAGACATGAAAAAGTCACATGATGCAATTATTGATGATCTTAATAGAAAGCTTTTAGAT
GTAACACAAAAATATACAGAAAAGAAGTTGGAAATGGAGAAATTGCTACTGGAAAATGACAGCTTAAGTA
AGGATGTAAGCCGCCTAGAAACTGTGTTTGTACCTCCTGAGAAACATGAAAAAGAGATAATAGCTCTGAA
ATCCAATATTGTTGAACTTAAGAAACAGCTGTCTGAACTTAAGAAAAAATGTGGTGAAGACCAGGAGAAA
ATACACGCTCTCACATCTGAAAACACTAACTTGAAGAAGATGATGAGTAATCAGTATGTGCCAGTTAAAA
CCCATGAAGAGGTTAAAATGACACTGAATGACACGTTAGCCAAAACTAACAGAGAATTATTAGATGTGAA
GAAAAAATTTGAAGATATAAATCAGGAATTTGTAAAAATAAAAGATAAGAATGAAATATTAAAAAGAAAC
CTGGAAAACACTCAGAACCAAATAAAAGCTGAGTACATCAGCCTGGCAGAGCACGAGGCAAAGATGAGCT
CGCTAAGTCAGAGCATGAGAAAGGTGCAGGATAGTAATGCTGAAATCTTGGCCAACTACAGAAAAGGCCA
AGAAGAGATTGTGACACTGCATGCCGAAATTAAAGCCCAGAAGAAGGAGCTCGACACAATACAAGAATGC
ATTAAGGTAAAATACGCCCCAATTGTCAGCTTTGAGGAGTGCGAGAGAAAATTTAAAGCAACAGAGAAAG
AACTAAAAGACCAGTTATCAGAGCAGACACAAAAGTATAGTGTCAGTGAAGAAGAAGTCAAGAAAAACAA
GCAAGAGAATGACAAGTTAAAGAAGGAGATTTTTACCCTTCAGAAAGATTTGAGAGATAAGACAGTTCTC
ATTGAGAAGTCTCATGAAATGGAAAGAGCATTAAGCAGAAAAACAGACGAGCTAAACAAACAGTTAAAAG
ACTTGTCACAGAAATACACGGAAGTAAAGAATGTGAAAGAGAAGCTAGTAGAAGAAAATGCCAAACAGAC
TTCTGAGATACTTGCAGTGCAAAATCTTTTGCAAAAACAACATGTTCCATTGGAACAGGTTGAGGCTCTG
AAAAAATCTCTTAATGGCACAATTGAAAATCTAAAGGAAGAACTGAAGAGTATGCAAAGGTGTTACGAGA
AAGAGCAGCAGACAGTGACCAAACTGCATCAATTGTTGGAGAATCAAAAGAACTCTTCTGTACCCCTGGC
AGAGCATTTGCAGATTAAAGAAGCATTTGAGAAAGAAGTTGGAATCATAAAAGCCAGCTTGAGAGAAAAG
GAAGAAGAAAGCCAAAACAAAATGGAAGAAGTCTCCAAACTTCAGTCGGAGGTTCAGAATACTAAACAAG
CATTAAAAAAATTAGAGACTAGAGAGGTAGTTGACTTGTCTAAATATAAAGCAACAAAAAGTGATTTGGA
GACACAGATTTCTAGCTTAAATGAAAAATTGGCCAATCTGAATAGAAAGTATGAGGAAGTATGTGAGGAA
GTTTTGCATGCCAAAAAGAAGGAAATATCTGCAAAAGATGAGAAGGAATTACTGCATTTCAGCATTGAGC
AAGAAATTAAGGATCAGAAGGAACGATGTGATAAGTCCTTAACAACAATCACAGAGTTACAAAGAAGAAT
ACAAGAATCTGCTAAACAAATAGAAGCAAAAGATAATAAGATAACTGAACTGCTTAATGATGTGGAAAGA
TTAAAACAGGCACTCAATGGCCTTTCCCAACTCACCTACACAAGTGGGAACCCCACCAAGAGGCAGAGCC
AGCTGATTGACACTCTGCAGCACCAAGTGAAATCTCTGGAGCAACAGCTGGCCGATGCTGACAGACAGCA
CCAAGAAGTAATTGCAATTTATCGGACACACCTTCTTAGTGCTGCACAGGGTCACATGGATGAAGATGTT
CAGGAGGCTCTGCTCCAGATCATACAAATGCGGCAGGGGCTTGTGTGCTAG

Translation (1416 aa):
MKSLKSRLRRQDVPGPASSGAAAASAHAADWNKYDDRLMKAAERGDVEKVTSILAKKGVNPGKLDVEGRS
VFHVVTSKGNLECLNAILIHGVDITTSDTAGRNALHLAAKYGHALCLQKLLQYNCPTEHADLQGRTALHD
AAMADCPSSIQLLCDHGASVNAKDVDGRTPLVLATQMSRPTICQLLIDRGADVNSRDKQNRTALMLGCEY
GCRDAVEVLIKNGADISLLDALGHDSSYYARIGDNLDILTLLKTASENTNKGRELWKKGPSLQQRNLTHM
QDEVNVKSHQREHQNIQDLEIENEDLKERLRKIQQEQRILLDKVNGLQLQLNEEVMVADDLESEREKLKS
LLAAKEKQHEESLRTIEALKNRFKYFESDHLGSGSHFSNRKEDMLLKQGQMYMADSQCTSPGIPAHMQSR
SMLRPLELSLPSQTSYSENEILKKELEAMRTFCESAKQDRLKLQNELAHKVAECKALALECERVKEDSDE
QIKQLEDALKDVQKRMYESEGKVKQMQTHFLALKEHLTSEAASGNHRLTEELKDQLKDLKVKYEGASAEV
GKLRNQIKQNEMIVEEFKRDEGKLIEENKRLQKELSMCEMEREKKGRKVTEMEGQAKELSAKLALSIPAE
KFENMKSSLSNEVNEKAKKLVEMEREHEKSLSEIRQLKRELENVKAKLAQHVKPEEHEQVKSRLEQKSGE
LGKKITELTLKNQTLQKEIEKVYLDNKLLKEQAHNLTIEMKNHYVPLKVSEDMKKSHDAIIDDLNRKLLD
VTQKYTEKKLEMEKLLLENDSLSKDVSRLETVFVPPEKHEKEIIALKSNIVELKKQLSELKKKCGEDQEK
IHALTSENTNLKKMMSNQYVPVKTHEEVKMTLNDTLAKTNRELLDVKKKFEDINQEFVKIKDKNEILKRN
LENTQNQIKAEYISLAEHEAKMSSLSQSMRKVQDSNAEILANYRKGQEEIVTLHAEIKAQKKELDTIQEC
IKVKYAPIVSFEECERKFKATEKELKDQLSEQTQKYSVSEEEVKKNKQENDKLKKEIFTLQKDLRDKTVL
IEKSHEMERALSRKTDELNKQLKDLSQKYTEVKNVKEKLVEENAKQTSEILAVQNLLQKQHVPLEQVEAL
KKSLNGTIENLKEELKSMQRCYEKEQQTVTKLHQLLENQKNSSVPLAEHLQIKEAFEKEVGIIKASLREK
EEESQNKMEEVSKLQSEVQNTKQALKKLETREVVDLSKYKATKSDLETQISSLNEKLANLNRKYEEVCEE
VLHAKKKEISAKDEKELLHFSIEQEIKDQKERCDKSLTTITELQRRIQESAKQIEAKDNKITELLNDVER
LKQALNGLSQLTYTSGNPTKRQSQLIDTLQHQVKSLEQQLADADRQHQEVIAIYRTHLLSAAQGHMDEDV
QEALLQIIQMRQGLVC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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