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Report for CCDS58393.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58393.1 Public Homo sapiens 15 MORF4L1 24 110 108 CCDS HistoryNCBI Gene:10933Re-query CCDS DB by CCDS ID:58393.1Re-query CCDS DB by GeneID:10933See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58393.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000559345.5 ENSP00000452717.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000559345.5Link to Ensembl Protein Viewer:ENSP00000452717.1Re-query CCDS DB by Nucleotide ID:ENST00000559345Re-query CCDS DB by Protein ID:ENSP00000452717
Original member Current member EBI ENST00000558502.5 ENSP00000452808.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000558502.5Link to Ensembl Protein Viewer:ENSP00000452808.1Re-query CCDS DB by Nucleotide ID:ENST00000558502Re-query CCDS DB by Protein ID:ENSP00000452808
Original member Current member NCBI NM_001265603.2 NP_001252532.1 Accepted alive Link to Nucleotide Sequence:NM_001265603.2Link to Protein Sequence:NP_001252532.1Re-query CCDS DB by Nucleotide ID:NM_001265603Re-query CCDS DB by Protein ID:NP_001252532Link to BLAST:NP_001252532.1
Original member Current member NCBI NM_001265604.2 NP_001252533.1 Accepted alive Link to Nucleotide Sequence:NM_001265604.2Link to Protein Sequence:NP_001252533.1Re-query CCDS DB by Nucleotide ID:NM_001265604Re-query CCDS DB by Protein ID:NP_001252533Link to BLAST:NP_001252533.1
Original member Current member NCBI NM_001265605.2 NP_001252534.1 Accepted alive Link to Nucleotide Sequence:NM_001265605.2Link to Protein Sequence:NP_001252534.1Re-query CCDS DB by Nucleotide ID:NM_001265605Re-query CCDS DB by Protein ID:NP_001252534Link to BLAST:NP_001252534.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001252532.1 235 Q9UBU8-3 235 100% 0 0
NP_001252533.1 235 Q9UBU8-3 235 100% 0 0
NP_001252534.1 235 Q9UBU8-3 235 100% 0 0

Chromosomal Locations for CCDS 58393.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 78887291 78887349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78890989 78891014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78891484 78891572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78892212 78892313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78893539 78893627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78894058 78894230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78894820 78894904 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 78896983 78897067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (708 nt):
ATGAGAGGGGCTGCCCCAGGAAAGAAGACATCTGGTCTGCAACAGAAAAATGTTGAAGTGAAAACGAAAA
AGAACAAACAGAAAACACCTGGAAATGGAGATGGTGGCAGTACCAGTGAGACCCCTCAGCCTCCTCGGAA
GAAAAGGGCCCGGGTAGATCCTACTGTTGAAAATGAGGAAACATTCATGAACAGAGTTGAAGTTAAAGTA
AAGATTCCTGAAGAGCTAAAACCGTGGCTTGTTGATGACTGGGACTTAATTACCAGGCAAAAACAGCTCT
TTTATCTTCCTGCCAAGAAGAATGTGGATTCCATTCTTGAGGATTATGCAAATTACAAGAAATCTCGTGG
AAACACAGATAATAAGGAGTATGCGGTTAATGAAGTTGTGGCAGGGATAAAAGAATACTTCAACGTAATG
TTGGGTACCCAGCTACTCTATAAATTTGAGAGACCACAGTATGCTGAAATTCTTGCAGATCATCCCGATG
CACCCATGTCCCAGGTGTATGGAGCGCCACATCTCCTGAGATTATTTGTACGAATTGGAGCAATGTTGGC
TTATACACCTCTGGATGAGAAGAGCCTTGCTTTATTACTCAATTATCTTCACGATTTCCTAAAGTACCTG
GCAAAGAATTCTGCAACTTTGTTCAGTGCCAGCGATTATGAAGTGGCTCCTCCTGAGTACCATCGGAAAG
CTGTGTGA

Translation (235 aa):
MRGAAPGKKTSGLQQKNVEVKTKKNKQKTPGNGDGGSTSETPQPPRKKRARVDPTVENEETFMNRVEVKV
KIPEELKPWLVDDWDLITRQKQLFYLPAKKNVDSILEDYANYKKSRGNTDNKEYAVNEVVAGIKEYFNVM
LGTQLLYKFERPQYAEILADHPDAPMSQVYGAPHLLRLFVRIGAMLAYTPLDEKSLALLLNYLHDFLKYL
AKNSATLFSASDYEVAPPEYHRKAV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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