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Report for CCDS45437.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45437.1 Public Homo sapiens 16 REXO5 24 110 108 CCDS HistoryNCBI Gene:81691Re-query CCDS DB by CCDS ID:45437.1Re-query CCDS DB by GeneID:81691See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45437.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000348433.10 ENSP00000261378.8 Accepted alive Link to Ensembl Transcript Viewer:ENST00000348433.10Link to Ensembl Protein Viewer:ENSP00000261378.8Re-query CCDS DB by Nucleotide ID:ENST00000348433Re-query CCDS DB by Protein ID:ENSP00000261378
Original member Current member NCBI NM_001144924.2 NP_001138396.1 Accepted alive Link to Nucleotide Sequence:NM_001144924.2Link to Protein Sequence:NP_001138396.1Re-query CCDS DB by Nucleotide ID:NM_001144924Re-query CCDS DB by Protein ID:NP_001138396Link to BLAST:NP_001138396.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138396.1 743 Q96IC2-2 743 100% 0 0

Chromosomal Locations for CCDS 45437.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 20806954 20807091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20813190 20813302 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20814927 20815053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20816116 20816212 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20821762 20821902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20824439 20824527 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20825833 20825948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20827058 20827196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20827353 20827447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20828435 20828537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20832156 20832259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20833003 20833123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20839755 20839859 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20840331 20840468 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20844629 20844845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20845054 20845241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20846221 20846339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 20849399 20849480 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2232 nt):
ATGGAGCCAGAGAGGGAAGGGACCGAGAGACACCCCAGGAAGGTCAGGGAAAGCAGGCAGGCCCCAAATA
AGCTGGTCGGGGCAGCTGAGGCGATGAAAGCCGGTTGGGATCTCGAGGAGAGTCAGCCCGAGGCCAAGAA
AGCCCGCTTATCTACCATTTTATTTACTGACAACTGTGAAGTAACCCATGACCAGCTGTGTGAATTGCTG
AAGTATGCAGTTCTGGGCAAATCCAATGTTCCAAAACCCAGCTGGTGCCAGCTTTTTCATCAAAACCACC
TAAACAACGTAGTGGTTTTTGTTCTGCAGGGAATGAGTCAGCTACACTTTTACAGGTTCTATTTGGAGTT
TGGATGTCTTCGAAAAGCATTCAGACATAAATTCCGCTTGCCTCCACCATCATCTGATTTTCTAGCTGAT
GTTGTTGGGCTACAAACTGAACAAAGAGCTGGAGATCTGCCCAAGACAATGGAAGGGCCTTTACCTTCTA
ATGCAAAAGCCGCCATCAACCTTCAGGATGATCCCATCATTCAAAAGTATGGCTCTAAGAAAGTGGGCTT
GACCAGATGCCTTCTGACAAAGGAGGAAATGAGAACGTTTCACTTTCCATTACAAGGTTTTCCTGATTGT
GAAAACTTTTTACTTACCAAATGTAATGGTTCTATAGCAGACAATAGTCCTCTCTTTGGACTTGACTGTG
AAATGTGCCTCACATCCAAGGGGAGAGAGCTAACACGCATCTCACTGGTTGCTGAAGGAGGCTGCTGTGT
TATGGATGAACTGGTCAAACCTGAAAACAAGATTCTGGACTACCTCACCAGCTTTTCGGGAATCACGAAG
AAGATTCTTAACCCAGTGACGACCAAACTCAAAGATGTACAGAGGCAGTTAAAAGCACTGCTTCCTCCTG
ATGCTGTGTTAGTGGGCCACTCCTTAGATTTGGATCTCAGAGCACTGAAAATGATACATCCATATGTTAT
TGATACATCGTTGCTTTATGTCAGAGAGCAGGGCAGAAGATTTAAGCTCAAGTTCTTAGCCAAAGTTATT
TTGGGGAAGGATATACAGTGTCCAGACAGACTTGGTCATGATGCCACAGAAGATGCTAGAACAATCCTTG
AATTGGCTCGGTATTTCCTTAAGCATGGCCCAAAAAAGATTGCAGAACTAAATCTAGAAGCACTAGCTAA
TCACCAAGAAATACAAGCAGCAGGCCAAGAGCCTAAAAACACAGCAGAAGTACTTCAGCACCCAAACACA
AGTGTTTTAGAATGCTTGGATTCAGTGGGTCAGAAGCTTCTTTTTTTGACCCGGGAGACAGATGCTGGTG
AACTTCCATCTTCCAGAAATTGTCAAACTATTAAGTGTCTTTCAAATAAAGAGGTTCTTGAGCAGGCCAG
AGTGGAAATCCCCCTGTTTCCCTTCAGCATTGTTCAGTTCTCTTTTAAGGCCTTTTCACCTGTCCTCACT
GAGGAGATGAACAAAAGGATGAGGATCAAGTGGACAGAGATATCAACTGTCTATGCTGGGCCATTTAGCA
AAAATTGCAATCTCAGGGCTCTGAAGAGGCTGTTTAAAAGCTTTGGCCCAGTCCAGTCAATGACTTTTGT
TCTTGAAACCCGTCAGGTGCAGAGGCCTGTGACAGAGCTCACGCTTGATTGTGACACCCTCGTGAATGAG
CTGGAAGGAGATTCTGAAAACCAAGGCTCTATATATCTGTCTGGAGTGAGTGAAACCTTCAAAGAACAGC
TATTGCAGGAGCCCCGCCTCTTTCTTGGCCTGGAAGCTGTGATCTTGCCTAAAGATCTTAAAAGTGGAAA
GCAGAAAAAATACTGTTTCCTGAAATTCAAAAGTTTTGGCAGTGCCCAGCAGGCCCTCAACATTCTCACA
GGCAAGGACTGGAAGCTGAAAGGCAGGCATGCCCTAACCCCCAGGCACCTCCATGCCTGGCTCAGAGGCT
TACCACCTGAATCAACAAGGCTCCCAGGGCTTCGTGTTGTACCTCCCCCCTTTGAACAGGAGGCCTTGCA
GACTCTGAAACTGGACCACCCGAAGATAGCAGCCTGGCGCTGGAGCCGGAAGATTGGAAAGCTCTACAAC
AGCTTGTGCCCGGGCACTCTCTGCCTCATCCTGCTGCCAGGAACCAAGAGCACTCATGGTTCACTCTCTG
GTCTAGGACTGATGGGAATAAAAGAGGAAGAAGAAAGCGCTGGCCCAGGCCTGTGTTCGTGA

Translation (743 aa):
MEPEREGTERHPRKVRESRQAPNKLVGAAEAMKAGWDLEESQPEAKKARLSTILFTDNCEVTHDQLCELL
KYAVLGKSNVPKPSWCQLFHQNHLNNVVVFVLQGMSQLHFYRFYLEFGCLRKAFRHKFRLPPPSSDFLAD
VVGLQTEQRAGDLPKTMEGPLPSNAKAAINLQDDPIIQKYGSKKVGLTRCLLTKEEMRTFHFPLQGFPDC
ENFLLTKCNGSIADNSPLFGLDCEMCLTSKGRELTRISLVAEGGCCVMDELVKPENKILDYLTSFSGITK
KILNPVTTKLKDVQRQLKALLPPDAVLVGHSLDLDLRALKMIHPYVIDTSLLYVREQGRRFKLKFLAKVI
LGKDIQCPDRLGHDATEDARTILELARYFLKHGPKKIAELNLEALANHQEIQAAGQEPKNTAEVLQHPNT
SVLECLDSVGQKLLFLTRETDAGELPSSRNCQTIKCLSNKEVLEQARVEIPLFPFSIVQFSFKAFSPVLT
EEMNKRMRIKWTEISTVYAGPFSKNCNLRALKRLFKSFGPVQSMTFVLETRQVQRPVTELTLDCDTLVNE
LEGDSENQGSIYLSGVSETFKEQLLQEPRLFLGLEAVILPKDLKSGKQKKYCFLKFKSFGSAQQALNILT
GKDWKLKGRHALTPRHLHAWLRGLPPESTRLPGLRVVPPPFEQEALQTLKLDHPKIAAWRWSRKIGKLYN
SLCPGTLCLILLPGTKSTHGSLSGLGLMGIKEEEESAGPGLCS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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