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Report for CCDS86513.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86513.1 Public Homo sapiens 16 SULT1A2 24 110 108 CCDS HistoryNCBI Gene:6799Re-query CCDS DB by CCDS ID:86513.1Re-query CCDS DB by GeneID:6799See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86513.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533150.5 ENSP00000435271.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000533150.5Link to Ensembl Protein Viewer:ENSP00000435271.1Re-query CCDS DB by Nucleotide ID:ENST00000533150Re-query CCDS DB by Protein ID:ENSP00000435271
Original member NCBI NM_001363863.2 NP_001350792.1 Updated not alive Link to Nucleotide Sequence:NM_001363863.2Link to Protein Sequence:NP_001350792.1Re-query CCDS DB by Nucleotide ID:NM_001363863Re-query CCDS DB by Protein ID:NP_001350792
Current member NCBI NM_001363863.3 NP_001350792.2 Accepted alive Link to Nucleotide Sequence:NM_001363863.3Link to Protein Sequence:NP_001350792.2Re-query CCDS DB by Nucleotide ID:NM_001363863Re-query CCDS DB by Protein ID:NP_001350792Link to BLAST:NP_001350792.2

Chromosomal Locations for CCDS 86513.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 28592028 28592140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28592263 28592481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28595367 28595675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 28595783 28595930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (789 nt):
ATGGAGCTGATCCAGGACATCTCTCGCCCGCCACTGGAGTACGTGAAGGGGGTCCCGCTCATCAAGTACT
TTGCAGAGGCACTGGGGCCCCTGCAGAGCTTCCAGGCCCGGCCTGATGACCTGCTCATCAGCACCTACCC
CAAGTCCGGCACCACCTGGGTGAGCCAGATTCTGGACATGATCTACCAGGGCGGTGACCTGGAAAAGTGT
CACCGAGCTCCCATCTTCATGCGGGTGCCCTTCCTTGAGTTCAAAGTCCCAGGGATTCCCTCAGGTGTGT
GTGTCCTGGGTGCAAGGGGAGTGGAGGAAGACAGGGCTGGGGCTTCAGCTCACCAGACCTTCCCTGACCC
ACTGCTCAGGGATGGAGACTCTGAAAAACACACCAGCCCCACGACTCCTGAAGACACACCTGCCCCTGGC
TCTGCTCCCCCAGACTCTGTTGGATCAGAAGGTCAAGCAATCCAAGCCTCCACTGAGGAGCCCTCTGCTG
CTCAGAACCCCAAAAGGGAGATTCAAAAGATCCTGGAGTTTGTGGGGCGCTCCCTGCCAGAGGAGACTGT
GGACCTCATGGTTGAGCACACGTCGTTCAAGGAGATGAAGAAGAACCCTATGACCAACTACACCACCGTC
CGCCGGGAGTTCATGGACCACAGCATCTCCCCCTTCATGAGGAAAGGCATGGCTGGGGACTGGAAGACCA
CCTTCACCGTGGCGCAGAATGAGCGCTTCGATGCGGACTATGCGAAGAAGATGGCAGGCTGCAGCCTCAG
CTTCCGCTCTGAGCTGTGA

Translation (262 aa):
MELIQDISRPPLEYVKGVPLIKYFAEALGPLQSFQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKC
HRAPIFMRVPFLEFKVPGIPSGVCVLGARGVEEDRAGASAHQTFPDPLLRDGDSEKHTSPTTPEDTPAPG
SAPPDSVGSEGQAIQASTEEPSAAQNPKREIQKILEFVGRSLPEETVDLMVEHTSFKEMKKNPMTNYTTV
RREFMDHSISPFMRKGMAGDWKTTFTVAQNERFDADYAKKMAGCSLSFRSEL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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