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Report for CCDS45459.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45459.1 Public Homo sapiens 16 YPEL3 24 110 108 CCDS HistoryNCBI Gene:83719Re-query CCDS DB by CCDS ID:45459.1Re-query CCDS DB by GeneID:83719See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45459.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000398838.8 ENSP00000381818.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000398838.8Link to Ensembl Protein Viewer:ENSP00000381818.4Re-query CCDS DB by Nucleotide ID:ENST00000398838Re-query CCDS DB by Protein ID:ENSP00000381818
Original member Current member EBI ENST00000566595.5 ENSP00000456427.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000566595.5Link to Ensembl Protein Viewer:ENSP00000456427.1Re-query CCDS DB by Nucleotide ID:ENST00000566595Re-query CCDS DB by Protein ID:ENSP00000456427
Original member Current member EBI ENST00000563788.5 ENSP00000457976.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000563788.5Link to Ensembl Protein Viewer:ENSP00000457976.1Re-query CCDS DB by Nucleotide ID:ENST00000563788Re-query CCDS DB by Protein ID:ENSP00000457976
Original member Current member NCBI NM_001145524.2 NP_001138996.1 Accepted alive Link to Nucleotide Sequence:NM_001145524.2Link to Protein Sequence:NP_001138996.1Re-query CCDS DB by Nucleotide ID:NM_001145524Re-query CCDS DB by Protein ID:NP_001138996Link to BLAST:NP_001138996.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138996.1 119 P61236-1 119 100% 0 0

Chromosomal Locations for CCDS 45459.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 30092710 30092799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30094789 30094897 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30095103 30095146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 30095252 30095368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (360 nt):
ATGGTGCGGATTTCAAAGCCCAAGACGTTTCAGGCCTACTTGGATGATTGTCACCGGAGGTATAGCTGTG
CCCACTGCCGCGCTCACCTGGCCAACCACGACGACCTCATCTCCAAGTCCTTCCAGGGCAGTCAGGGGCG
TGCCTACCTCTTCAACTCAGTGGTGAACGTGGGCTGCGGGCCAGCCGAGGAGCGGGTGCTGCTGACCGGC
CTCCATGCTGTCGCCGACATCCACTGCGAGAACTGCAAGACCACTTTGGGCTGGAAATATGAACAGGCCT
TTGAGAGCAGCCAGAAGTACAAAGAGGGGAAGTACATCATTGAACTCAACCACATGATCAAAGACAACGG
CTGGGACTGA

Translation (119 aa):
MVRISKPKTFQAYLDDCHRRYSCAHCRAHLANHDDLISKSFQGSQGRAYLFNSVVNVGCGPAEERVLLTG
LHAVADIHCENCKTTLGWKYEQAFESSQKYKEGKYIIELNHMIKDNGWD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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