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Report for CCDS42238.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42238.1 Public Homo sapiens 17 MYBBP1A 24 110 108 CCDS HistoryNCBI Gene:10514Re-query CCDS DB by CCDS ID:42238.1Re-query CCDS DB by GeneID:10514See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 42238.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381556.6 ENSP00000370968.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000381556.6Link to Ensembl Protein Viewer:ENSP00000370968.2Re-query CCDS DB by Nucleotide ID:ENST00000381556Re-query CCDS DB by Protein ID:ENSP00000370968
Original member Current member NCBI NM_001105538.2 NP_001099008.1 Accepted alive Link to Nucleotide Sequence:NM_001105538.2Link to Protein Sequence:NP_001099008.1Re-query CCDS DB by Nucleotide ID:NM_001105538Re-query CCDS DB by Protein ID:NP_001099008Link to BLAST:NP_001099008.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001099008.1 1332 Q9BQG0-2 1332 100% 0 0

Chromosomal Locations for CCDS 42238.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 4538940 4538975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4539439 4539967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4540348 4540484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4541463 4541564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4541784 4541891 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4542464 4542532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4542616 4542741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4542913 4543165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4544489 4544646 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4544751 4544921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4545026 4545175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4545259 4545345 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4545610 4545761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4545846 4545942 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4547958 4548057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4548143 4548310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4548524 4548649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4549332 4549442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4550058 4550353 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4551880 4551997 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4552125 4552292 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4552451 4552626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4553810 4553917 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4554019 4554093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4554195 4554278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4554861 4554956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 4555127 4555324 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3999 nt):
ATGGAGAGCCGGGATCCCGCCCAGCCGATGTCGCCTGGAGAAGCGACGCAGAGTGGCGCCCGGCCTGCCG
ACCGCTATGGCCTATTGAAGCACAGTCGCGAGTTCTTGGACTTCTTCTGGGACATTGCGAAGCCTGAGCA
GGAGACGCGACTTGCGGCCACGGAGAAGCTGCTGGAGTATCTGCGTGGCAGGCCGAAGGGGTCCGAGATG
AAATATGCCCTGAAGCGTCTAATCACGGGACTCGGGGTCGGGCGAGAAACAGCCCGGCCCTGCTACAGTT
TGGCCCTGGCACAGCTGTTACAGTCTTTTGAAGACCTCCCCTTGTGCAGCATCCTGCAGCAGATACAAGA
AAAATATGACCTGCATCAGGTGAAGAAGGCAATGCTGAGACCTGCTCTCTTTGCAAACCTGTTTGGAGTG
CTCGCCCTCTTTCAGTCAGGTCGGCTGGTGAAGGACCAGGAGGCACTGATGAAGTCGGTGAAGCTGCTGC
AGGCCCTGGCCCAGTACCAAAACCACTTGCAGGAGCAGCCCCGGAAGGCCCTGGTGGACATCCTCTCCGA
GGTCTCGAAGGCCACATTGCAGGAGATCCTGCCGGAGGTCCTCAAAGCCGACTTGAATATAATACTCAGC
TCCCCTGAACAGCTAGAGCTCTTCCTCCTGGCCCAGCAGAAGGTGCCCTCCAAGCTCAAGAAGCTGGTGG
GATCCGTGAACCTATTCTCAGATGAGAATGTCCCCAGGCTGGTGAATGTGCTGAAGATGGCCGCCTCCTC
TGTGAAGAAGGACCGCAAGCTGCCCGCCATTGCTCTGGACCTGCTCCGCCTGGCACTCAAGGAAGACAAG
TTCCCACGGTTCTGGAAGGAGGTGGTGGAACAAGGGCTGCTGAAGATGCAGTTCTGGCCAGCCAGCTACC
TGTGTTTCCGCCTGCTGGGCGCGGCCCTGCCCCTGCTGACCAAGGAGCAGCTGCACCTGGTGATGCAGGG
AGACGTGATCCGCCATTACGGGGAGCACGTGTGCACTGCTAAGCTCCCAAAGCAGTTCAAGTTTGCCCCA
GAGATGGACGATTACGTGGGCACCTTCCTAGAGGGGTGCCAGGATGACCCTGAGCGGCAGCTGGCCGTGC
TAGTGGCCTTCTCATCTGTCACCAACCAAGGCCTCCCTGTCACGCCTACTTTCTGGCGGGTCGTGCGGTT
CCTGAGCCCTCCGGCCCTGCAGGGCTATGTGGCCTGGCTGCGGGCCATGTTTCTCCAGCCAGACCTGGAC
TCCTTGGTTGACTTCAGCACCAACAACCAGAAGAAAGCCCAGGATTCATCGCTCCACATGCCTGAGCGAG
CTGTGTTCCGGCTGAGGAAATGGATCATCTTTCGATTGGTGAGCATTGTGGACAGCCTGCACCTGGAGAT
GGAGGAGGCCTTGACTGAGCAGGTGGCCAGGTTTTGTTTGTTCCACTCGTTCTTTGTCACAAAGAAGCCC
ACATCCCAGATCCCTGAGACAAAGCACCCGTTCTCCTTCCCTTTGGAAAACCAGGCCCGAGAGGCTGTCA
GCAGTGCCTTCTTCAGTCTGTTGCAGACCCTCAGCACGCAGTTCAAGCAGGCACCGGGCCAGACCCAGGG
TGGGCAGCCCTGGACCTACCACCTGGTGCAGTTCGCAGACCTCCTGTTGAATCACAGCCACAACGTGACC
ACCGTGACACCCTTCACTGCGCAGCAGCGCCAGGCCTGGGACCGGATGCTGCAGACTCTGAAGGAGCTGG
AGGCCCACTCCGCAGAGGCCAGGGCTGCTGCCTTCCAGCACCTTCTGCTCCTCGTGGGCATCCACCTCCT
CAAGTCCCCTGCAGAGAGCTGTGACCTGCTGGGTGACATCCAGACCTGCATCAGGAAAAGTCTGGGAGAG
AAGCCCCGCCGGAGCCGCACCAAGACCATCGACCCCCAGGAACCCCCGTGGGTAGAGGTGCTGGTGGAGA
TCTTGCTGGCCCTGTTGGCCCAGCCCAGCCACCTCATGCGCCAGGTGGCCCGGAGCGTGTTTGGCCACAT
CTGCTCCCACCTGACCCCGCGTGCCCTGCAGCTAATTCTGGATGTGCTGAACCCCGAGACCAGTGAGGAT
GAGAATGACCGTGTGGTGGTGACGGACGATTCTGATGAGCGGCGGCTGAAGGGTGCAGAGGACAAGAGCG
AGGAAGGTGAGGACAACAGAAGCTCAGAGAGTGAAGAGGAGAGCGAGGGGGAGGAGAGCGAGGAGGAGGA
GCGCGACGGGGACGTGGATCAGGGCTTCCGGGAACAGCTGATGACCGTGCTGCAGGCTGGGAAGGCGCTG
GGTGGAGAGGACAGTGAGAACGAGGAGGAGCTGGGGGATGAGGCCATGATGGCCCTGGACCAGAGCCTCG
CCAGCCTCTTTGCCGAGCAGAAGCTGCGTATCCAGGCCCGGCGAGACGAGAAGAACAAGCTGCAGAAGGA
GAAGGCTCTGCGGCGCGACTTCCAGATCCGGGTGCTGGACCTGGTGGAGGTGCTAGTGACCAAGCAGCCC
GAGAATGCCCTGGTCCTGGAGCTGCTGGAGCCGCTGCTGAGCATCATCCGGCGCAGCCTGCGCAGCAGCA
GCTCCAAACAGGAGCAGGACCTTCTGCACAAGACGGCGCGCATCTTCACGCACCACCTGTGCCGTGCCCG
GCGCTACTGCCACGACTTGGGTGAGCGCGCAGGGGCCCTGCACGCCCAGGTGGAGCGGTTGGTGCAGCAG
GCTGGCCGCCAGCCCGACTCCCCCACCGCCCTCTACCACTTCAACGCCTCTCTCTACCTGCTCCGGGTCT
TGAAGGGCAACACTGCTGAGGGCTGCGTGCATGAGACACAGGAGAAGCAGAAAGCTGGCACTGACCCCAG
CCACATGCCCACGGGCCCGCAGGCTGCCAGCTGCTTGGACTTGAACCTGGTGACCCGGGTGTACTCGACA
GCACTGAGCTCCTTCCTGACCAAGCGCAACAGCCCCCTCACAGTTCCCATGTTCCTCAGCCTCTTCTCCC
GGCACCCGGTGCTCTGTCAGAGCCTGCTCCCCATCCTGGTCCAGCATATCACGGGCCCGGTGCGGCCCCG
TCATCAGGCCTGCCTGCTGCTCCAGAAGACCCTGTCCATGCGGGAGGTGAGGTCGTGCTTTGAGGACCCC
GAGTGGAAGCAGCTGATGGGCCAGGTCCTAGCAAAGGTCACCGAGAACTTGCGCGTGCTGGGGGAGGCGC
AGACCAAGGCGCAGCATCAGCAGGCACTGTCCTCCCTGGAGCTGCTCAACGTTCTCTTCAGGACCTGCAA
ACATGAGAAGCTGACCTTGGACCTGACGGTGCTCCTGGGTGTGCTGCAGGGGCAACAGCAGAGCCTACAG
CAGGGGGCACACTCCACCGGCTCCAGCCGCCTGCACGACCTCTACTGGCAGGCCATGAAAACCCTGGGAG
TCCAGCGCCCCAAGTTGGAGAAGAAGGATGCCAAGGAGATCCCCAGTGCCACCCAGAGCCCCATCAGTAA
GAAGCGGAAGAAAAAGGGATTCTTGCCAGAGACGAAGAAGCGCAAGAAACGCAAGTCAGAGGATGGCACG
CCAGCGGAGGATGGCACACCTGCAGCCACCGGCGGGAGCCAGCCCCCCAGCATGGGCAGGAAGAAGAGGA
ACAGGACAAAGGCTAAGGTCCCAGCCCAGGCAAACGGGACGCCAACCACCAAGAGTCCAGCCCCTGGCGC
CCCCACCCGGAGCCCCAGCACCCCTGCCAAATCCCCAAAACTGCAGAAGAAAAACCAGAAGCCGTCCCAG
GTGAATGGAGCTCCCGGGTCCCCCACGGAACCTGCAGGCCAAAAGCAGCATCAGAAGGCTCTTCCCAAAA
AGGGGGTCTTGGGCAAATCACCACTGTCCGCGCTGGCACGGAAAAAGGCAAGGCTGTCTTTGGTCATCAG
GAGTCCCAGCCTGCTTCAGAGTGGGGCCAAGAAGAAAGCACAGACTCTGAGATTCACAATCAGCAGCTCT
AAAAAATAA

Translation (1332 aa):
MESRDPAQPMSPGEATQSGARPADRYGLLKHSREFLDFFWDIAKPEQETRLAATEKLLEYLRGRPKGSEM
KYALKRLITGLGVGRETARPCYSLALAQLLQSFEDLPLCSILQQIQEKYDLHQVKKAMLRPALFANLFGV
LALFQSGRLVKDQEALMKSVKLLQALAQYQNHLQEQPRKALVDILSEVSKATLQEILPEVLKADLNIILS
SPEQLELFLLAQQKVPSKLKKLVGSVNLFSDENVPRLVNVLKMAASSVKKDRKLPAIALDLLRLALKEDK
FPRFWKEVVEQGLLKMQFWPASYLCFRLLGAALPLLTKEQLHLVMQGDVIRHYGEHVCTAKLPKQFKFAP
EMDDYVGTFLEGCQDDPERQLAVLVAFSSVTNQGLPVTPTFWRVVRFLSPPALQGYVAWLRAMFLQPDLD
SLVDFSTNNQKKAQDSSLHMPERAVFRLRKWIIFRLVSIVDSLHLEMEEALTEQVARFCLFHSFFVTKKP
TSQIPETKHPFSFPLENQAREAVSSAFFSLLQTLSTQFKQAPGQTQGGQPWTYHLVQFADLLLNHSHNVT
TVTPFTAQQRQAWDRMLQTLKELEAHSAEARAAAFQHLLLLVGIHLLKSPAESCDLLGDIQTCIRKSLGE
KPRRSRTKTIDPQEPPWVEVLVEILLALLAQPSHLMRQVARSVFGHICSHLTPRALQLILDVLNPETSED
ENDRVVVTDDSDERRLKGAEDKSEEGEDNRSSESEEESEGEESEEEERDGDVDQGFREQLMTVLQAGKAL
GGEDSENEEELGDEAMMALDQSLASLFAEQKLRIQARRDEKNKLQKEKALRRDFQIRVLDLVEVLVTKQP
ENALVLELLEPLLSIIRRSLRSSSSKQEQDLLHKTARIFTHHLCRARRYCHDLGERAGALHAQVERLVQQ
AGRQPDSPTALYHFNASLYLLRVLKGNTAEGCVHETQEKQKAGTDPSHMPTGPQAASCLDLNLVTRVYST
ALSSFLTKRNSPLTVPMFLSLFSRHPVLCQSLLPILVQHITGPVRPRHQACLLLQKTLSMREVRSCFEDP
EWKQLMGQVLAKVTENLRVLGEAQTKAQHQQALSSLELLNVLFRTCKHEKLTLDLTVLLGVLQGQQQSLQ
QGAHSTGSSRLHDLYWQAMKTLGVQRPKLEKKDAKEIPSATQSPISKKRKKKGFLPETKKRKKRKSEDGT
PAEDGTPAATGGSQPPSMGRKKRNRTKAKVPAQANGTPTTKSPAPGAPTRSPSTPAKSPKLQKKNQKPSQ
VNGAPGSPTEPAGQKQHQKALPKKGVLGKSPLSALARKKARLSLVIRSPSLLQSGAKKKAQTLRFTISSS
KK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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