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Report for CCDS58529.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58529.1 Public Homo sapiens 17 RNF112 24 110 108 CCDS HistoryNCBI Gene:7732Re-query CCDS DB by CCDS ID:58529.1Re-query CCDS DB by GeneID:7732See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58529.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000461366.2 ENSP00000454919.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000461366.2Link to Ensembl Protein Viewer:ENSP00000454919.1Re-query CCDS DB by Nucleotide ID:ENST00000461366Re-query CCDS DB by Protein ID:ENSP00000454919
Original member Current member NCBI NM_007148.5 NP_009079.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007148.5Link to Protein Sequence:NP_009079.2Re-query CCDS DB by Nucleotide ID:NM_007148Re-query CCDS DB by Protein ID:NP_009079Link to BLAST:NP_009079.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009079.2 631 Q9ULX5-1 631 100% 0 0

Chromosomal Locations for CCDS 58529.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 19411409 19411462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19411630 19411670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19412498 19412783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19412938 19413144 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19413280 19413411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19413577 19413681 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19414095 19414145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19414449 19414505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19414586 19414660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19414770 19414887 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19415038 19415207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19415286 19415339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19415518 19415592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 19415705 19416175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1896 nt):
ATGCCAAGGCCCGCCTTGTCAGTCACTTCCTTTTGTCATCGGCTTGGCAAACGGGAGAGAAAACAGAGCT
TC
ATGGGAAACAGCGGCAACAGTTGGTCCCATACACCTTTCCCCAAGTTGGAGCTAGGCCTGGGGCCCCA
G
CCCATGGCGCCCCGGGAGCTCCCTACCTGCTCCATCTGCCTGGAGAGGTTGCGCGACCCCATCTCGCTG
GAC
TGTGGCCACGACTTCTGCATACGGTGCTTCAGCACACACCGTCTCCCGGGCTGTGAGCCGCCCTGCT
GT
CCTGAGTGCCGGAAGATATGCAAGCAGAAGAGGGGCCTCCGGAGCCTGGGCGAGAAGATGAAGCTCCT
G
CCGCAGCGGCCGCTGCCCCCTGCACTGCAGGAGACGTGTCCTGTGAGGGCGGAGCCGCTGCTGCTGGTT
CGC
ATCAATGCCTCTGGGGGCCTCATCCTTAGGATGGGGGCCATCAACCGCTGCCTGAAGCACCCTCTGG
CC
AGGGACACCCCAGTCTGCCTCCTCGCTGTCCTGGGGGAGCAGCACTCAGGGAAGTCCTTCCTCCTCAA
C
CATTTGCTTCAGGGCTTGCCGGGCCTGGAGTCTGGTGAGGGCGGCCGGCCAAGAGGAGGAGAGGCATCC
CTG
CAGGGCTGCAGGTGGGGCGCCAATGGCCTCGCCAGGGGCATATGGATGTGGAGCCACCCCTTCTTGC
TG
GGGAAAGAAGGGAAGAAGGTGGCGGTGTTCCTGGTGGACACAGGGGATGCCATGAGCCCTGAGCTGAG
C
AGGGAAACAAGGATCAAGCTCTGTGCTCTCACCACGATGCTGAGCTCCTACCAGATCCTCAGCACCTCC
CAG
GAGCTGAAGGATACAGACCTGGACTATCTGGAGATGTTTGTCCACGTGGCCGAGGTGATGGGCAAGC
AT
TATGGGATGGTGCCAATCCAGCATCTGGACCTCTTAGTTCGTGACTCATCCCACCCCAACAAGGCAGG
G
CAGGGGCATGTAGGCAACATCTTCCAGAGATTGTCTGGCAGATACCCCAAGGTGCAGGAGCTGCTGCAA
GGG
AAGCGAGCCCGTTGCTGCCTCTTGCCTGCCCCAGGGAGGCGGCGGATGAACCAAGGCCATGCAAGCC
CT
GGTGACACAGATGATGACTTCCGCCACCTTCTGGGGGCCTACGTCTCAGATGTGCTGAGTGCGGCCCC
C
CAGCACGCTAAGAGCCGCTGCCAGGGGTACTGGAACGAGGGGCGCGCCGTGGCCAGGGGGGACAGACGC
CTA
CTCACGGGGCAGCAGCTAGCTCAGGAAATCAAGAACCTCTCAGGATGGATGGGGAGGACAGGGCCCG
GT
TTCACCTCTCCGGATGAGATGGCTGCTCAGCTGCACGACCTGAGGAAGGTGGAAGCTGCCAAGAGGGA
G
TTCGAGGAGTATGTGAGGCAGCAGGACGTAGCCACCAAGCGCATATTCTCTGCGCTGCGGGTCCTGCCA
GAC
ACCATGCGGAACCTCCTCTCCACCCAGAAAGATGCCATTCTGGCCCGCCATGGTGTGGCCTTACTCT
GC
AAGGGGAGAGATCAGACCTTGGAGGCACTGGAAGCTGAGCTGCAGGCCACGGCCAAGGCCTTCATGGA
C
TCCTACACGATGCGCTTCTGTGGCCACCTAGCTGCTGTGGGGGGTGCTGTGGGGGCCGGGCTCATGGGC
CTG
GCAGGGGGCGTGGTGGGTGCTGGCATGGCAGCAGCTGCACTGGCTGCAGAGGCTGGGATGGTGGCTG
CT
GGAGCTGCCGTGGGGGCCACAGGGGCCGCTGTGGTTGGGGGTGGCGTGGGTGCTGGGTTGGCTGCCAC
A
GTGGGCTGCATGGAGAAGGAGGAGGATGAGAGGCTTCTGGAAGGGGACCGAGAGCCCCTTCTCCAGGAA
GAG
TAA


Translation (631 aa):
MPRPALSVTSFCHRLGKRERKQSFMGNSGNSWSHTPFPKLELGLGPQPMAPRELPTCSICLERLRDPISL
D
CGHDFCIRCFSTHRLPGCEPPCCPECRKICKQKRGLRSLGEKMKLLPQRPLPPALQ
ETCPVRAEPLLLV
R
INASGGLILRMGAINRCLKHPLARDTPVCLLAVLGEQHSGKSFLLNHLLQGLPGL
ESGEGGRPRGGEAS
L
QGCRWGANGLARGIWMWSHPFLLGKEGKK
VAVFLVDTGDAMSPELSRETRIKLCALTTMLSSYQILSTS
Q
ELKDTDLDYLE
MFVHVAEVMGKHYGMVPIQHLDLLVRDSSHPNKAGQGHVGNIFQRLSGRYPKVQELLQ
G
KRARCCLLPAPGRRRMNQGHASPG
DTDDDFRHLLGAYVSDVLSAAPQHAKSRCQGYWNEGRAVARGDRR
L
LTGQQLAQEIK
NLSGWMGRTGPGFTSPDEMAAQLHDLRKVEAAKREFEEYVRQQDVATKRIFSALRVLP
D
TMRNLLSTQKDAILARHGVALLCKGRDQTLEALEAELQATAKAFMDSYTMRFCGHLAAVGGAVGAGLMG
L
AGGVVGAGMAAAALAAEAGMVAAGAAVGATGAAVVGGGVGAGLAATVGCMEKEEDERLLEGDREPLLQE
E




Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser