NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS45902.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45902.1 Public Homo sapiens 19 ABHD17A 24 110 108 CCDS HistoryNCBI Gene:81926Re-query CCDS DB by CCDS ID:45902.1Re-query CCDS DB by GeneID:81926See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45902.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000292577.12 ENSP00000292577.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000292577.12Link to Ensembl Protein Viewer:ENSP00000292577.6Re-query CCDS DB by Nucleotide ID:ENST00000292577Re-query CCDS DB by Protein ID:ENSP00000292577
Original member Current member EBI ENST00000676686.1 ENSP00000504042.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000676686.1Link to Ensembl Protein Viewer:ENSP00000504042.1Re-query CCDS DB by Nucleotide ID:ENST00000676686Re-query CCDS DB by Protein ID:ENSP00000504042
Original member Current member NCBI NM_001130111.2 NP_001123583.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001130111.2Link to Protein Sequence:NP_001123583.1Re-query CCDS DB by Nucleotide ID:NM_001130111Re-query CCDS DB by Protein ID:NP_001123583Link to BLAST:NP_001123583.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123583.1 310 Q96GS6-1 310 100% 0 0

Chromosomal Locations for CCDS 45902.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 1877200 1877425 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1877508 1877687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1879921 1880115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 1881235 1881566 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGAATGGGCTGTCGCTGAGTGAGCTCTGCTGCCTCTTCTGCTGCCCGCCCTGCCCCGGCCGCATCGCTG
CCAAGCTCGCCTTCCTGCCGCCGGAGGCCACCTACTCCCTGGTGCCTGAGCCCGAGCCGGGGCCTGGTGG
GGCCGGGGCCGCCCCCTTGGGGACCCTGAGAGCCTCCTCGGGCGCACCCGGGCGCTGGAAGCTGCACCTG
ACGGAGCGTGCCGACTTCCAGTACAGCCAGCGCGAGCTGGACACCATCGAGGTCTTCCCCACCAAGAGCG
CCCGCGGCAACCGCGTCTCCTGCATGTATGTTCGCTGCGTGCCTGGTGCCAGGTACACGGTCCTCTTCTC
GCACGGCAATGCCGTGGACCTGGGCCAGATGAGCAGCTTCTACATTGGCCTGGGCTCCCGCCTCCACTGC
AACATCTTCTCCTACGACTACTCCGGCTACGGTGCCAGCTCGGGCAGGCCTTCCGAGAGGAACCTCTATG
CCGACATCGACGCCGCCTGGCAGGCCCTGCGCACCAGGTACGGCATCAGCCCGGACAGCATCATCCTGTA
CGGGCAGAGCATCGGCACGGTGCCCACCGTGGACCTGGCCTCGCGCTACGAGTGTGCCGCGGTGGTGCTG
CACTCGCCGCTCACCTCGGGCATGCGCGTCGCCTTCCCCGACACCAAGAAGACCTACTGCTTCGACGCCT
TCCCTAACATCGAGAAGGTGTCCAAGATCACGTCTCCCGTGCTCATCATCCACGGCACGGAGGACGAGGT
GATCGACTTCTCGCACGGGCTGGCGCTCTACGAGCGCTGCCCCAAGGCGGTGGAGCCGCTGTGGGTGGAG
GGCGCCGGGCACAACGACATCGAGCTCTACAGCCAGTACCTGGAGCGCCTGCGTCGCTTCATCTCCCAGG
AGCTGCCCAGCCAGCGCGCCTAG

Translation (310 aa):
MNGLSLSELCCLFCCPPCPGRIAAKLAFLPPEATYSLVPEPEPGPGGAGAAPLGTLRASSGAPGRWKLHL
TERADFQYSQRELDTIEVFPTKSARGNRVSCMYVRCVPGARYTVLFSHGNAVDLGQMSSFYIGLGSRLHC
NIFSYDYSGYGASSGRPSERNLYADIDAAWQALRTRYGISPDSIILYGQSIGTVPTVDLASRYECAAVVL
HSPLTSGMRVAFPDTKKTYCFDAFPNIEKVSKITSPVLIIHGTEDEVIDFSHGLALYERCPKAVEPLWVE
GAGHNDIELYSQYLERLRRFISQELPSQRA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH