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Report for CCDS77225.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
77225.1 Public Homo sapiens 19 DENND1C 24 110 108 CCDS HistoryNCBI Gene:79958Re-query CCDS DB by CCDS ID:77225.1Re-query CCDS DB by GeneID:79958See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 77225.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543576.5 ENSP00000437805.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543576.5Link to Ensembl Protein Viewer:ENSP00000437805.1Re-query CCDS DB by Nucleotide ID:ENST00000543576Re-query CCDS DB by Protein ID:ENSP00000437805
Original member Current member NCBI NM_001290331.2 NP_001277260.1 Accepted alive Link to Nucleotide Sequence:NM_001290331.2Link to Protein Sequence:NP_001277260.1Re-query CCDS DB by Nucleotide ID:NM_001290331Re-query CCDS DB by Protein ID:NP_001277260Link to BLAST:NP_001277260.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001277260.1 757 Q8IV53-2 757 100% 0 0

Chromosomal Locations for CCDS 77225.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6467504 6468118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468234 6468441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468578 6468645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468846 6468953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6469596 6469640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6470295 6470366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6471265 6471305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6471406 6471496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6472889 6472993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475274 6475399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475484 6475585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475706 6475751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475837 6475937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6476857 6476967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477074 6477127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477218 6477283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477378 6477458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6478783 6478852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6478937 6479056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6479669 6479712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2274 nt):
ATGCAGATGGTGCCTAAATTCTGCTTCCCTTTTGATGTGGAAAGGGAGCCCCCCAGCCCCGCCGTGCAGC
ATTTCACCTTCGCCCTCACAGACCTTGCCGGCAACCGCAGATTTGGTTTCTGCCGCCTGCGGGCGGGTAC
CCAGAGCTGTCTCTGCATCCTCAGCCACCTGCCTTGGTTCGAGGTGTTTTACAAGCTATTGAACACAGTG
GGAGACCTCCTAGCCCAGGACCAAGTCACCGAGGCAGAGGAACTTCTTCAAAATCTGTTTCAGCAGTCCC
TGTCTGGGCCCCAGGCCTCAGTGGGGCTTGAGCTGGGCAGCGGAGTGACGGTCTCCAGCGGGCAGGGTAT
CCCCCCCCCTACCCGGGGGAATAGCAAGCCGCTTTCCTGCTTCGTGGCCCCGGACTCCGGCCGCCTGCCA
TCCATCCCTGAGAACAGGAACCTAACGGAGCTGGTGGTGGCCGTGACTGACGAGAACATCGTGGGGCTGT
TCGCGGCGCTCCTGGCCGAGAGAAGAGTCCTGCTCACCGCCAGCAAACTCAGCACCCTGACCTCGTGCGT
CCACGCGTCCTGCGCGCTCCTGTACCCCATGCGCTGGGAGCACGTGCTGATCCCCACGCTGCCCCCACAC
CTGCTGGACTACTGCTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCGAGAGAGTAC
GAGAAAAAGCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGA
CGTGCAGGCGCTGCCTCCAGACGTGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCC
GGGGAAGGGGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCG
TCTGCAGCCCGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTCT
GCAGGCCTTCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGTTCATCGAAGCCCGGCTGGAGAAG
CTCAACAAGGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGG
CCCTTCGATCCTATCAGCTCTGGGCCGACAATCTAAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAA
GGCCAAGACCCAACCAGCCGTCAAGAACATGTACCGCTCGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGC
CTTCTAATGTATAAGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCA
GCCGCTCAGACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGGAAAGAACCGGCCCCTTCGCCC
CAGCAGGAGACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGACACCCCCACTGAGCCCT
GAGGATGAGGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGG
ATTTGTTGAGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCA
GAGTTTAGACTGCTGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGCCCAACATACCAAGATGGCAA
CCAGACGATAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGT
CTTTGGATGCCACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGT
CACGTCTCCATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCT
CTCACAGAGCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAA
ACCCCACTCCCTGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCC
CACAAAGCCCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTG
GAGGACCCCAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAAC
CAGGAGCCCTGAATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAG
AGTCGCTGATCTTAAGAAGTGCTTTGAGGGTTAA

Translation (757 aa):
MQMVPKFCFPFDVEREPPSPAVQHFTFALTDLAGNRRFGFCRLRAGTQSCLCILSHLPWFEVFYKLLNTV
GDLLAQDQVTEAEELLQNLFQQSLSGPQASVGLELGSGVTVSSGQGIPPPTRGNSKPLSCFVAPDSGRLP
SIPENRNLTELVVAVTDENIVGLFAALLAERRVLLTASKLSTLTSCVHASCALLYPMRWEHVLIPTLPPH
LLDYCCAPMPYLIGVHASLAERVREKALEDVVVLNVDANTLETTFNDVQALPPDVVSLLRLRLRKVALAP
GEGVSRLFLKAQALLFGGYRDALVCSPGQPVTFSEEVFLAQKPGAPLQAFHRRAVHLQLFKQFIEARLEK
LNKGEGFSDQFEQEITGCGASSGALRSYQLWADNLKKGGGALLHSVKAKTQPAVKNMYRSAKSGLKGVQS
LLMYKDGDSVLQRGGSLRAPALPSRSDRLQQRLPITQHFGKNRPLRPSRRRQLEEGTSEPPGAGTPPLSP
EDEGCPWAEEALDSSFLGSGEELDLLSEILDSLSMGAKSAGSLRPSQSLDCCHRGDLDSCFSLPNIPRWQ
PDDKKLPEPEPQPLSLPSLQNASSLDATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSP
LTEPLILHLTPSHKAAEDSTAQENPTPWLSTAPTEPSPPESPQILAPTKPNFDIAWTSQPLDPSSDPSSL
EDPRARPPKALLAERAHLQPREEPGALNSPATPTSNCQKSQPSSRPRVADLKKCFEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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