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Report for CCDS45938.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45938.1 Public Homo sapiens 19 DENND1C 24 110 108 CCDS HistoryNCBI Gene:79958Re-query CCDS DB by CCDS ID:45938.1Re-query CCDS DB by GeneID:79958See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45938.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381480.7 ENSP00000370889.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381480.7Link to Ensembl Protein Viewer:ENSP00000370889.1Re-query CCDS DB by Nucleotide ID:ENST00000381480Re-query CCDS DB by Protein ID:ENSP00000370889
Original member Current member NCBI NM_024898.4 NP_079174.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024898.4Link to Protein Sequence:NP_079174.2Re-query CCDS DB by Nucleotide ID:NM_024898Re-query CCDS DB by Protein ID:NP_079174Link to BLAST:NP_079174.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_079174.2 801 Q8IV53-1 801 100% 0 0

Chromosomal Locations for CCDS 45938.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 6467504 6468118 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468234 6468441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468578 6468645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6468846 6468953 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6469596 6469640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6470295 6470366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6471265 6471305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6471406 6471496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6472889 6472993 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475274 6475399 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475484 6475585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475706 6475751 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6475837 6475937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6476857 6476967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477074 6477127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477218 6477283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6477378 6477458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6478783 6478852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6478937 6479056 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6479669 6479718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6479859 6479902 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6479987 6480051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 6481679 6481695 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2406 nt):
ATGGAATCCAGAGCTGAAGGGGGCTCCCCTGCTGTGTTTGATTGGTTCTTCGAAGCGGCCTGCCCTGCCT
CCCTGCAGGAGGATCCCCCCATCCTGCGGCAGTTCCCTCCAGACTTCAGGGACCAGGAAGCTATGCAGAT
GGTGCCTAAATTCTGCTTCCCTTTTGATGTGGAAAGGGAGCCCCCCAGCCCCGCCGTGCAGCATTTCACC
TTCGCCCTCACAGACCTTGCCGGCAACCGCAGATTTGGTTTCTGCCGCCTGCGGGCGGGTACCCAGAGCT
GTCTCTGCATCCTCAGCCACCTGCCTTGGTTCGAGGTGTTTTACAAGCTATTGAACACAGTGGGAGACCT
CCTAGCCCAGGACCAAGTCACCGAGGCAGAGGAACTTCTTCAAAATCTGTTTCAGCAGTCCCTGTCTGGG
CCCCAGGCCTCAGTGGGGCTTGAGCTGGGCAGCGGAGTGACGGTCTCCAGCGGGCAGGGTATCCCCCCCC
CTACCCGGGGGAATAGCAAGCCGCTTTCCTGCTTCGTGGCCCCGGACTCCGGCCGCCTGCCATCCATCCC
TGAGAACAGGAACCTAACGGAGCTGGTGGTGGCCGTGACTGACGAGAACATCGTGGGGCTGTTCGCGGCG
CTCCTGGCCGAGAGAAGAGTCCTGCTCACCGCCAGCAAACTCAGCACCCTGACCTCGTGCGTCCACGCGT
CCTGCGCGCTCCTGTACCCCATGCGCTGGGAGCACGTGCTGATCCCCACGCTGCCCCCACACCTGCTGGA
CTACTGCTGCGCGCCCATGCCCTACCTCATTGGAGTGCACGCCAGTCTCGCCGAGAGAGTACGAGAAAAA
GCCCTGGAGGACGTCGTGGTGCTGAACGTGGACGCCAATACCTTGGAGACGACCTTTAACGACGTGCAGG
CGCTGCCTCCAGACGTGGTGTCCCTGCTGAGGCTCCGGCTCAGGAAGGTCGCCCTGGCCCCCGGGGAAGG
GGTGTCCCGTCTCTTCCTCAAAGCCCAGGCCCTGCTCTTCGGGGGGTACCGCGACGCACTCGTCTGCAGC
CCGGGCCAGCCAGTGACCTTCAGTGAGGAAGTCTTCTTGGCCCAGAAGCCTGGGGCACCTCTGCAGGCCT
TCCACCGGCGGGCTGTGCACCTGCAGCTGTTCAAACAGTTCATCGAAGCCCGGCTGGAGAAGCTCAACAA
GGGGGAGGGCTTCTCAGATCAATTCGAGCAGGAGATCACTGGCTGCGGGGCCTCCTCAGGGGCCCTTCGA
TCCTATCAGCTCTGGGCCGACAATCTAAAGAAAGGTGGTGGCGCCCTCCTGCACTCAGTCAAGGCCAAGA
CCCAACCAGCCGTCAAGAACATGTACCGCTCGGCCAAGAGTGGCTTGAAGGGGGTGCAGAGCCTTCTAAT
GTATAAGGATGGGGACTCTGTCCTGCAGAGGGGGGGCTCTCTGAGGGCCCCAGCCCTCCCCAGCCGCTCA
GACCGCCTGCAGCAACGCCTCCCAATCACTCAGCACTTTGGAAAGAACCGGCCCCTTCGCCCCAGCAGGA
GACGCCAGCTGGAAGAGGGAACTTCCGAGCCCCCAGGGGCGGGGACACCCCCACTGAGCCCTGAGGATGA
GGGGTGCCCGTGGGCAGAAGAAGCTCTGGACAGCAGCTTCTTGGGGTCTGGAGAAGAACTGGATTTGTTG
AGCGAGATTCTGGACAGTCTTAGCATGGGAGCCAAGAGCGCAGGCAGCCTGAGACCGAGCCAGAGTTTAG
ACTGCTGTCACAGAGGAGACCTGGACAGCTGCTTCAGCCTGCCCAACATACCAAGATGGCAACCAGACGA
TAAGAAACTACCAGAGCCGGAGCCCCAGCCCCTTTCCCTGCCATCCCTGCAAAATGCCTCGTCTTTGGAT
GCCACCAGCTCTTCAAAGGACTCCAGGTCCCAGCTGATACCCTCAGAGTCCGACCAAGAAGTCACGTCTC
CATCCCAGTCCTCAACAGCTTCTGCAGACCCAAGCATCTGGGGGGACCCCAAACCCTCTCCTCTCACAGA
GCCCCTAATTCTTCATCTCACCCCTTCCCACAAGGCAGCTGAAGATTCTACAGCCCAGGAAAACCCCACT
CCCTGGCTCTCCACTGCACCCACTGAGCCCAGCCCTCCAGAAAGCCCCCAAATTCTGGCCCCCACAAAGC
CCAACTTTGATATAGCCTGGACGTCCCAGCCCCTTGATCCTTCCTCAGACCCCAGTTCTCTGGAGGACCC
CAGAGCCCGGCCTCCCAAAGCCCTGCTGGCAGAGCGCGCTCACCTCCAGCCACGGGAGGAACCAGGAGCC
CTGAATTCCCCTGCTACACCCACCAGCAACTGTCAAAAGTCCCAGCCCAGCAGCCGGCCCAGAGTCGCTG
ATCTTAAGAAGTGCTTTGAGGGTTAA

Translation (801 aa):
MESRAEGGSPAVFDWFFEAACPASLQEDPPILRQFPPDFRDQEAMQMVPKFCFPFDVEREPPSPAVQHFT
FALTDLAGNRRFGFCRLRAGTQSCLCILSHLPWFEVFYKLLNTVGDLLAQDQVTEAEELLQNLFQQSLSG
PQASVGLELGSGVTVSSGQGIPPPTRGNSKPLSCFVAPDSGRLPSIPENRNLTELVVAVTDENIVGLFAA
LLAERRVLLTASKLSTLTSCVHASCALLYPMRWEHVLIPTLPPHLLDYCCAPMPYLIGVHASLAERVREK
ALEDVVVLNVDANTLETTFNDVQALPPDVVSLLRLRLRKVALAPGEGVSRLFLKAQALLFGGYRDALVCS
PGQPVTFSEEVFLAQKPGAPLQAFHRRAVHLQLFKQFIEARLEKLNKGEGFSDQFEQEITGCGASSGALR
SYQLWADNLKKGGGALLHSVKAKTQPAVKNMYRSAKSGLKGVQSLLMYKDGDSVLQRGGSLRAPALPSRS
DRLQQRLPITQHFGKNRPLRPSRRRQLEEGTSEPPGAGTPPLSPEDEGCPWAEEALDSSFLGSGEELDLL
SEILDSLSMGAKSAGSLRPSQSLDCCHRGDLDSCFSLPNIPRWQPDDKKLPEPEPQPLSLPSLQNASSLD
ATSSSKDSRSQLIPSESDQEVTSPSQSSTASADPSIWGDPKPSPLTEPLILHLTPSHKAAEDSTAQENPT
PWLSTAPTEPSPPESPQILAPTKPNFDIAWTSQPLDPSSDPSSLEDPRARPPKALLAERAHLQPREEPGA
LNSPATPTSNCQKSQPSSRPRVADLKKCFEG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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