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Report for CCDS12341.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12341.1 Public Homo sapiens 19 FAM32A 24 110 108 CCDS HistoryNCBI Gene:26017Re-query CCDS DB by CCDS ID:12341.1Re-query CCDS DB by GeneID:26017See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12341.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263384.12 ENSP00000263384.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263384.12Link to Ensembl Protein Viewer:ENSP00000263384.6Re-query CCDS DB by Nucleotide ID:ENST00000263384Re-query CCDS DB by Protein ID:ENSP00000263384
Original member Current member NCBI NM_014077.4 NP_054796.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014077.4Link to Protein Sequence:NP_054796.1Re-query CCDS DB by Nucleotide ID:NM_014077Re-query CCDS DB by Protein ID:NP_054796Link to BLAST:NP_054796.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_054796.1 112 Q9Y421-1 112 100% 0 0

Chromosomal Locations for CCDS 12341.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 16185443 16185516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16185624 16185765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16190520 16190573 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 16190887 16190955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGGAGGCCTACGAGCAGGTCCAAAAGGGACCCCTGAAGCTGAAAGGCGTCGCAGAGCTGGGAGTGACCA
AGCGGAAGAAGAAAAAGAAGGACAAAGACAAAGCGAAACTCCTGGAAGCAATGGGAACGAGCAAAAAGAA
CGAGGAGGAGAAGCGGCGCGGCCTGGACAAGCGGACCCCGGCCCAGGCGGCCTTCGAGAAAATGCAGGAG
AAGCGGCAAATGGAAAGGATCCTAAAGAAGGCATCCAAAACCCACAAGCAGAGAGTGGAGGACTTCAACA
GACACCTGGACACACTCACGGAGCATTACGACATTCCCAAAGTCAGCTGGACGAAGTAG

Translation (112 aa):
MEAYEQVQKGPLKLKGVAELGVTKRKKKKKDKDKAKLLEAMGTSKKNEEEKRRGLDKRTPAQAAFEKMQE
KRQMERILKKASKTHKQRVEDFNRHLDTLTEHYDIPKVSWTK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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