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Report for CCDS32967.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32967.1 Public Homo sapiens 19 NR2C2AP 24 110 108 CCDS HistoryNCBI Gene:126382Re-query CCDS DB by CCDS ID:32967.1Re-query CCDS DB by GeneID:126382See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32967.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331552.12 ENSP00000332823.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331552.12Link to Ensembl Protein Viewer:ENSP00000332823.6Re-query CCDS DB by Nucleotide ID:ENST00000331552Re-query CCDS DB by Protein ID:ENSP00000332823
Original member Current member NCBI NM_176880.6 NP_795361.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_176880.6Link to Protein Sequence:NP_795361.1Re-query CCDS DB by Nucleotide ID:NM_176880Re-query CCDS DB by Protein ID:NP_795361Link to BLAST:NP_795361.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_795361.1 139 Q86WQ0-1 139 100% 0 0

Chromosomal Locations for CCDS 32967.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19201925 19202041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19202331 19202398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19202470 19202575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19202791 19202881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19203023 19203060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (420 nt):
ATGACCCACTCTTTGGTTTGTCCAGAGACAGTGAGCAGGGTGAGTTCAGTGCTGAATCGCAACACTCGGC
AGTTTGGAAAAAAACATCTTTTCGACCAGGATGAGGAGACATGTTGGAACTCAGACCAGGGCCCCTCCCA
GTGGGTGACGCTGGAGTTTCCCCAGCTCATCCGTGTCTCCCAGCTGCAGATCCAGTTTCAGGGTGGCTTC
TCCAGTCGCCGGGGCTGCCTGGAAGGTTCACAGGGCACTCAGGCTCTCCACAAGATTGTAGATTTCTACC
CTGAGGACAACAACTCGCTTCAGACTTTCCCCATACCAGCTGCTGAAGTGGACCGGCTGAAGGTGACGTT
TGAGGATGCCACTGACTTTTTTGGCCGTGTGGTCATCTACCACCTGCGGGTGCTTGGGGAGAAGGTGTGA

Translation (139 aa):
MTHSLVCPETVSRVSSVLNRNTRQFGKKHLFDQDEETCWNSDQGPSQWVTLEFPQLIRVSQLQIQFQGGF
SSRRGCLEGSQGTQALHKIVDFYPEDNNSLQTFPIPAAEVDRLKVTFEDATDFFGRVVIYHLRVLGEKV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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