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Report for CCDS12603.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12603.1 Public Homo sapiens 19 TMEM145 24 110 108 CCDS HistoryNCBI Gene:284339Re-query CCDS DB by CCDS ID:12603.1Re-query CCDS DB by GeneID:284339See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12603.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000301204.8 ENSP00000301204.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000301204.8Link to Ensembl Protein Viewer:ENSP00000301204.2Re-query CCDS DB by Nucleotide ID:ENST00000301204Re-query CCDS DB by Protein ID:ENSP00000301204
Original member Current member NCBI NM_173633.3 NP_775904.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_173633.3Link to Protein Sequence:NP_775904.2Re-query CCDS DB by Nucleotide ID:NM_173633Re-query CCDS DB by Protein ID:NP_775904Link to BLAST:NP_775904.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775904.2 493 Q8NBT3 493 100% 0 0

Chromosomal Locations for CCDS 12603.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 42313377 42313496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42314272 42314346 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42314451 42314528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42314613 42314699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42314792 42314851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42314993 42315077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42315188 42315259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42315372 42315440 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42316481 42316561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42316662 42316740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42316870 42316963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42317709 42317881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42320317 42320437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42323583 42323789 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 42324737 42324817 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1482 nt):
ATGGAGCCCCTGCGCGCGCCCGCGCTGCGCCGCCTGCTGCCGCCGCTGCTGCTCCTGCTGCTGTCACTGC
CCCCCCGCGCCCGGGCCAAGTACGTGCGGGGCAACCTCAGTTCCAAGGAGGACTGGGTGTTCCTGACAAG
ATTTTGTTTCCTCTCGGATTACGGCCGACTGGACTTCCGTTTCCGCTACCCTGAGGCCAAGTGCTGTCAG
AACATCCTCCTCTATTTTGATGACCCATCCCAGTGGCCAGCCGTGTACAAGGCAGGGGACAAGGACTGCC
TGGCCAAGGAGTCAGTGATCCGGCCGGAGAACAACCAGGTCATCAACCTCACCACCCAGTATGCCTGGTC
CGGCTGTCAGGTGGTATCAGAGGAGGGAACCCGCTACCTGAGCTGCTCCAGTGGCCGCAGCTTCCGCTCA
GGTGATGGATTGCAGCTGGAGTATGAGATGGTCCTCACCAATGGCAAGTCCTTCTGGACACGACACTTCT
CCGCTGATGAGTTTGGGATCCTGGAGACAGATGTGACCTTCCTCCTCATCTTCATCCTCATCTTCTTCCT
CTCTTGTTACTTTGGATATTTGCTGAAAGGTCGTCAGTTGCTCCACACAACTTATAAAATGTTCATGGCC
GCAGCAGGAGTAGAGGTCCTGAGCCTCCTATTTTTCTGCATCTACTGGGGTCAATATGCCACCGATGGCA
TTGGCAACGAGAGTGTGAAGATCTTGGCCAAGCTGCTCTTCTCCTCCAGCTTCCTCATCTTCCTGCTGAT
GCTTATCCTCCTGGGGAAGGGATTCACGGTGACACGGGGCCGCATCAGCCACGCGGGCTCCGTGAAGTTG
TCTGTCTACATGACCCTGTACACGCTCACCCATGTGGTGCTGCTCATCTACGAGGCGGAATTCTTTGACC
CAGGCCAGGTACTGTACACGTATGAGTCGCCGGCCGGCTACGGGCTCATTGGACTGCAGGTGGCGGCCTA
CGTGTGGTTCTGCTATGCTGTGCTTGTCTCACTGCGACACTTTCCTGAGAAGCAGCCTTTTTATGTGCCC
TTCTTTGCTGCCTATACCCTCTGGTTCTTTGCGGTTCCTGTCATGGCCCTGATTGCCAATTTCGGCATCC
CCAAGTGGGCCCGGGAGAAGATTGTCAATGGCATCCAGCTGGGGATCCACTTGTACGCCCATGGCGTGTT
TCTGATCATGACCCGCCCATCAGCGGCCAACAAGAACTTCCCGTACCACGTGCGCACGTCGCAGATCGCT
TCAGCCGGAGTCCCTGGACCCGGAGGGAGCCAATCCGCTGACAAGGCCTTCCCGCAGCACGTCTATGGGA
ACGTGACGTTTATCAGCGACTCGGTGCCCAACTTCACGGAGCTCTTCTCCATCCCCCCGCCCGCCACCTC
CCCCCTGCCCCGAGCGGCGCCGGATTCTGGGCTCCCGCTGTTCCGTGACCTCCGGCCCCCTGGCCCCCTT
CGAGACCTCTGA

Translation (493 aa):
MEPLRAPALRRLLPPLLLLLLSLPPRARAKYVRGNLSSKEDWVFLTRFCFLSDYGRLDFRFRYPEAKCCQ
NILLYFDDPSQWPAVYKAGDKDCLAKESVIRPENNQVINLTTQYAWSGCQVVSEEGTRYLSCSSGRSFRS
GDGLQLEYEMVLTNGKSFWTRHFSADEFGILETDVTFLLIFILIFFLSCYFGYLLKGRQLLHTTYKMFMA
AAGVEVLSLLFFCIYWGQYATDGIGNESVKILAKLLFSSSFLIFLLMLILLGKGFTVTRGRISHAGSVKL
SVYMTLYTLTHVVLLIYEAEFFDPGQVLYTYESPAGYGLIGLQVAAYVWFCYAVLVSLRHFPEKQPFYVP
FFAAYTLWFFAVPVMALIANFGIPKWAREKIVNGIQLGIHLYAHGVFLIMTRPSAANKNFPYHVRTSQIA
SAGVPGPGGSQSADKAFPQHVYGNVTFISDSVPNFTELFSIPPPATSPLPRAAPDSGLPLFRDLRPPGPL
RDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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