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Report for CCDS54276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54276.1 Public Homo sapiens 19 ZNF112 24 110 108 CCDS HistoryNCBI Gene:7771Re-query CCDS DB by CCDS ID:54276.1Re-query CCDS DB by GeneID:7771See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000337401.8 ENSP00000337081.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000337401.8Link to Ensembl Protein Viewer:ENSP00000337081.3Re-query CCDS DB by Nucleotide ID:ENST00000337401Re-query CCDS DB by Protein ID:ENSP00000337081
Original member Current member NCBI NM_001083335.2 NP_001076804.1 Accepted alive Link to Nucleotide Sequence:NM_001083335.2Link to Protein Sequence:NP_001076804.1Re-query CCDS DB by Nucleotide ID:NM_001083335Re-query CCDS DB by Protein ID:NP_001076804Link to BLAST:NP_001076804.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001076804.1 913 Q9UJU3-1 913 100% 0 0

Chromosomal Locations for CCDS 54276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44327433 44329936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44336623 44336718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44340416 44340542 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44343254 44343268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2742 nt):
ATGACCAAATTCCAGGAGATGGTGACATTCAAGGATGTTGCTGTGGTCTTCACTGAGGAGGAGCTGGGGC
TGCTGGACTCTGTCCAGAGGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTTAGT
AGCACATCAGCCCTTCAAGCCAGACCTAATATCCCAGCTGGAGAGAGAAGAAAAGCTTTTGATGGTGGAG
ACAGAAACCCCAAGAGATGGATGTTCAGGAAGGAAGAATCAACAAAAGATGGAGAGTATTCAGGAAGTAA
CAGTAAGCTACTTTTCCCCCAAAGAGCTTTCCTCCCGTCAGACCTGGCAACAAAGTGCAGGTGGGTTAAT
CAGGTGTCAAGATTTCCTGAAAGTTTTTCAAGGGAAGAATTCTCAGTTGCAAGAACAAGGTAATTCCCTC
GGCCAGGTTTGGGCAGGAATACCAGTTCAGATTTCTGAAGATAAGAACTATATATTCACTCATATAGGGA
ATGGCTCCAATTATATAAAAAGTCAAGGGTATCCATCTTGGAGGGCACATCATTCTTGGAGGAAAATGTA
TCTGAAAGAGTCACATAATTATCAGTGTAGATGTCAGCAAATTTCCATGAAAAATCATTTCTGTAAGTGT
GACAGTGTCAGTTGGCTCTCACATCACAATGATAAACTGGAAGTACACAGAAAAGAAAACTACAGCTGCC
ATGACTGTGGAGAAGATATCATGAAGGTATCATTACTTAATCAGGAGTCAATTCAAACAGAGGAGAAGCC
CTATCCATGTACTGGGTATAGAAAAGCCTTCAGTAATGACTCCAGCTCTGAGGTTCATCAGCAGTTCCAC
TTGGAAGGGAAGCCCTATACATACAGTTCATGTGGAAAGGGCTGTAATTATAGTTCACTTCTTCATATTC
ATCAAAATATTGAGAGAGAAGATGATATTGAGAATTCACATCTGAAATCCTATCAGAGAGTGCATACAGA
GGAGAAACCATGCAAATGTGGTGAATATGGTGAGAACTTCAATCACTGTTCCCCTCTTAACACTTATGAA
CTTATCCACACAGGTGAGATGTCCTATAGGCACAACATTTATGAGAAAGCCTTCAGTCATAGCTTAGACC
TTAATAGTATTTTTAGGGTCCATACTAGGGATGAACCCCATGAATATGAGGAAAATGAGAATGTCTTTAA
TCAGAGTTCATGTCTTCAAGTCCATCAAAAAATCCACACTGAAGAGAAACTATACACAGATATAGAGTAT
GGAAAGAGTTTCATTTGTAGTTCAAATCTTGACATTCAGCATAGGGTTCATATGGAAGAGAATTCATATA
ATTCTGAGGAGTGTGGTAATGGCTTCAGTCTGGCCTCACATTTTCAGGACCTTCAGATAGTCCACACTAA
GGAACAACCATATAAACGCTATGTGTGTAGTAACAGCTTCAGCCATAATTTATATCTTCAAGGTCATCCA
AAAATTCACATTGGAGAGAAACCACGTAAGGAGCATGGGAATGGCTTCAACTGGAGCTCAAAACTTAAAG
ATCATCAGAGAGTCCACACTGGACAGAAGCCATACAAATGCAATATATGCGGCAAAGGTTTCAATCATAG
ATCAGTTCTGAATGTTCATCAGAGAGTCCACACAGGAGAGAAACCTTATAAATGCGAGGAATGTGATAAG
GGATTCAGTCGGAGTTCATATCTTCAAGCCCATCAGAGAGTCCACACTGGAGAAAAACCTTATAAATGTG
AGGAATGTGGGAAGGGGTTCAGTCGAAATTCATACCTTCAAGGCCATCAGAGAGTTCACACTGGAGAAAA
ACCATACAAGTGTGAGGAGTGTGGGAAGGGCTTCAGTCGGAGTTCACACCTTCAAGGCCATCAGAGAGTC
CACACTGGAGAAAAACCATTCAAATGTGAGGAATGTGGGAAGGGGTTCAGTTGGAGCTTTAATCTTCAAA
TTCATCAGAGGGTTCACACAGGAGAAAAACCCTATAAATGTGAAGAATGTGGTAAAGGCTTCAGTAAGGC
CTCAACACTTTTGGCCCATCAGAGGGTCCACACGGGAGAGAAGCCATACCAATGTGATGAGTGTGGTAAG
AGTTTCAGTCAGAGATCATACCTTCAGAGTCATCAGAGTGTCCATTCTGGAGAAAGACCATATATATGTG
AGGTATGTGGAAAGGGCTTCAGTCAGAGAGCATATCTTCAAGGTCATCAGAGAGTCCACACTAGAGTGAA
ACCGTATAAATGTGAGATGTGTGGGAAGGGCTTTAGTCAGAGTTCGCGCCTTGAAGCACATCGGAGGGTT
CACACAGGAGGGAAACCATACAAATGTGAGGTGTGTACAAAGGGTTTCAGTGAGAGTTCACGCCTTCAAG
CACACCAAAGGGTTCATGTGGAAGGGAGACCCTATAAATGTGAACAGTGTGGTAAGGGTTTCAGTGGGTA
TTCAAGTCTTCAAGCCCATCACAGAGTCCACACAGGAGAGAAACCATACAAATGTGAGGTATGTGGAAAG
GGCTTCAGTCAGAGATCAAATCTTCAGGCTCACCAGAGAGTCCACACAGGAGAGAAACCATACAAATGTG
ATGCATGTGGTAAGGGTTTCCGTTGGAGCTCAGGTCTTCTCATTCATCAAAGAGTCCATAGTAGTGATAA
ATTCTATAAAAGCGAAGACTATGGTAAGGACTACCCTTCATCAGAGAATCTACACAGAAATGAAGATTCT
GTTTTGTTTTGA

Translation (913 aa):
MTKFQEMVTFKDVAVVFTEEELGLLDSVQRKLYRDVMLENFRNLLLVAHQPFKPDLISQLEREEKLLMVE
TETPRDGCSGRKNQQKMESIQEVTVSYFSPKELSSRQTWQQSAGGLIRCQDFLKVFQGKNSQLQEQGNSL
GQVWAGIPVQISEDKNYIFTHIGNGSNYIKSQGYPSWRAHHSWRKMYLKESHNYQCRCQQISMKNHFCKC
DSVSWLSHHNDKLEVHRKENYSCHDCGEDIMKVSLLNQESIQTEEKPYPCTGYRKAFSNDSSSEVHQQFH
LEGKPYTYSSCGKGCNYSSLLHIHQNIEREDDIENSHLKSYQRVHTEEKPCKCGEYGENFNHCSPLNTYE
LIHTGEMSYRHNIYEKAFSHSLDLNSIFRVHTRDEPHEYEENENVFNQSSCLQVHQKIHTEEKLYTDIEY
GKSFICSSNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHP
KIHIGEKPRKEHGNGFNWSSKLKDHQRVHTGQKPYKCNICGKGFNHRSVLNVHQRVHTGEKPYKCEECDK
GFSRSSYLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRV
HTGEKPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGK
SFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHRRV
HTGGKPYKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGK
GFSQRSNLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSEDYGKDYPSSENLHRNEDS
VLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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