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Report for CCDS33229.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33229.1 Public Homo sapiens 2 M1AP 24 110 108 CCDS HistoryNCBI Gene:130951Re-query CCDS DB by CCDS ID:33229.1Re-query CCDS DB by GeneID:130951See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33229.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000290536.9 ENSP00000290536.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000290536.9Link to Ensembl Protein Viewer:ENSP00000290536.5Re-query CCDS DB by Nucleotide ID:ENST00000290536Re-query CCDS DB by Protein ID:ENSP00000290536
Original member Current member EBI ENST00000421985.2 ENSP00000414882.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000421985.2Link to Ensembl Protein Viewer:ENSP00000414882.2Re-query CCDS DB by Nucleotide ID:ENST00000421985Re-query CCDS DB by Protein ID:ENSP00000414882
Original member Current member NCBI NM_001321739.2 NP_001308668.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001321739.2Link to Protein Sequence:NP_001308668.1Re-query CCDS DB by Nucleotide ID:NM_001321739Re-query CCDS DB by Protein ID:NP_001308668Link to BLAST:NP_001308668.1
Original member Current member NCBI NM_138804.5 NP_620159.2 Accepted alive Link to Nucleotide Sequence:NM_138804.5Link to Protein Sequence:NP_620159.2Re-query CCDS DB by Nucleotide ID:NM_138804Re-query CCDS DB by Protein ID:NP_620159Link to BLAST:NP_620159.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001308668.1 530 Q8TC57-1 530 100% 0 0
NP_620159.2 530 Q8TC57-1 530 100% 0 0

Chromosomal Locations for CCDS 33229.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 74558716 74558874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74559698 74559709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74560151 74560291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74562217 74562423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74575438 74575579 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74576456 74576618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74581674 74581847 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74607055 74607223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74614964 74615149 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 74640036 74640275 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1593 nt):
ATGCATCCTGGGCGAACTACTGGTAAAGGGCCCTCTACTCACACTCAGATTGACCAGCAACCTCCACGGC
TTCTCATTGTGCACATTGCTCTACCGTCCTGGGCTGACATCTGCACCAACCTCTGTGAGGCTCTGCAGAA
CTTCTTCTCTCTAGCCTGCAGCTTGATGGGCCCCAGCCGCATGTCCCTGTTCAGTTTATACATGGTACAA
GATCAGCATGAGTGCATCCTCCCTTTTGTGCAAGTGAAAGGGAACTTTGCTAGGTTGCAGACCTGCATCT
CAGAACTCCGCATGTTACAGAGAGAAGGGTGTTTCAGATCACAAGGTGCTTCTCTGCGGCTGGCAGTAGA
GGATGGGCTCCAGCAATTCAAACAATACAGCAGACATGTGACCACAAGGGCAGCTCTGACCTATACCTCC
CTGGAGATTACTATTCTGACTTCTCAGCCTGGAAAAGAGGTGGTCAAACAGTTGGAGGAAGGGTTGAAAG
ATACAGACCTAGCCAGAGTCAGGAGGTTTCAGGTCGTTGAGGTCACAAAGGGAATCCTAGAGCACGTGGA
CTCAGCGTCTCCTGTTGAGGATACCAGCAATGATGAGAGTTCTATTCTGGGAACTGACATTGACCTTCAG
ACTATAGACAATGATATCGTCAGCATGGAGATTTTCTTCAAAGCCTGGCTACATAACAGTGGAACAGACC
AAGAACAAATCCATCTTCTTCTTTCTTCACAGTGTTTCAGCAACATTTCCAGACCCAGAGATAATCCAAT
GTGTCTGAAATGTGATCTCCAAGAGCGACTGCTCTGCCCATCCCTACTCGCTGGCACAGCTGACGGCTCC
TTGAGAATGGATGACCCTAAAGGAGACTTCATCACACTCTACCAGATGGCTTCCCAGTCATCGGCCTCTC
ATTACAAGCTCCAAGTGATCAAGGCTTTAAAATCTAGCGGGCTCTGCGAGTCATTGACATATGGACTCCC
GTTCATCCTCAGACCTACAAGCTGTTGGCAGCTGGACTGGGATGAGCTGGAGACAAATCAGCAACATTTC
CATGCTTTGTGTCACAGCCTGCTGAAAAGGGAATGGCTGCTGTTAGCCAAGGGGGAACCACCGGGCCCAG
GACACAGCCAGAGAATTCCTGCCAGCACCTTCTATGTGATCATGCCGTCACACTCCCTCACACTGCTGGT
AAAGGCGGTGGCCACGCGGGAACTGATGCTGCCCAGCACCTTCCCCCTGCTACCTGAGGACCCACATGAT
GATAGCCTTAAGAATGTGGAGAGCATGCTGGACAGCCTGGAGCTGGAGCCCACCTACAACCCCTTGCATG
TTCAAAGCCACCTGTACTCACACCTGAGCAGCATCTATGCCAAGCCTCAGGGGCGGCTCCACCCACACTG
GGAGAGCCGAGCTCCGAGAAAGCATCCCTGCAAGACTGGGCAGTTGCAGACCAACCGAGCTCGAGCTACT
GTGGCCCCCCTGCCTATGACTCCTGTCCCAGGCAGAGCCTCCAAGATGCCAGCAGCCAGCAAATCTTCCT
CAGATGCCTTCTTCCTGCCTTCAGAGTGGGAGAAGGATCCCTCAAGGCCCTAA

Translation (530 aa):
MHPGRTTGKGPSTHTQIDQQPPRLLIVHIALPSWADICTNLCEALQNFFSLACSLMGPSRMSLFSLYMVQ
DQHECILPFVQVKGNFARLQTCISELRMLQREGCFRSQGASLRLAVEDGLQQFKQYSRHVTTRAALTYTS
LEITILTSQPGKEVVKQLEEGLKDTDLARVRRFQVVEVTKGILEHVDSASPVEDTSNDESSILGTDIDLQ
TIDNDIVSMEIFFKAWLHNSGTDQEQIHLLLSSQCFSNISRPRDNPMCLKCDLQERLLCPSLLAGTADGS
LRMDDPKGDFITLYQMASQSSASHYKLQVIKALKSSGLCESLTYGLPFILRPTSCWQLDWDELETNQQHF
HALCHSLLKREWLLLAKGEPPGPGHSQRIPASTFYVIMPSHSLTLLVKAVATRELMLPSTFPLLPEDPHD
DSLKNVESMLDSLELEPTYNPLHVQSHLYSHLSSIYAKPQGRLHPHWESRAPRKHPCKTGQLQTNRARAT
VAPLPMTPVPGRASKMPAASKSSSDAFFLPSEWEKDPSRP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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