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Report for CCDS58732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58732.1 Public Homo sapiens 2 CCDC74A 24 110 108 CCDS HistoryNCBI Gene:90557Re-query CCDS DB by CCDS ID:58732.1Re-query CCDS DB by GeneID:90557See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409856.8 ENSP00000387009.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409856.8Link to Ensembl Protein Viewer:ENSP00000387009.3Re-query CCDS DB by Nucleotide ID:ENST00000409856Re-query CCDS DB by Protein ID:ENSP00000387009
Original member Current member NCBI NM_001258306.3 NP_001245235.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001258306.3Link to Protein Sequence:NP_001245235.1Re-query CCDS DB by Nucleotide ID:NM_001258306Re-query CCDS DB by Protein ID:NP_001245235Link to BLAST:NP_001245235.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001245235.1 312 Q96AQ1-2 312 100% 0 0

Chromosomal Locations for CCDS 58732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131527971 131528220 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131529647 131529691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131530777 131530827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131531664 131531802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131532589 131532781 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131532864 131532937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131533013 131533069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131533269 131533398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (939 nt):
ATGAGCGGTGCGGGGGTGGCGGCTGGGACGCGGCCCCCCAGCTCGCCGACCCCGGGCTCTCGGCGCCGGC
GCCAGCGCCCCTCTGTGGGCGTCCAGTCCTTGAGGCCGCAGAGCCCGCAGCTCAGGCAGAGCGACCCGCA
GAAACGGAACCTGGACCTGGAGAAAAGCCTGCAGTTCCTGCAGCAGCAGCACTCGGAGATGCTGGCCAAG
CTCCATGAGGAGATCGAGCATCTGAAGCGGGAAAACAAGGATCTCCATTACAAGCTCATAATGAATCAGA
CATCACAGAAGAAAGACAGCCTCTCCATGTCAAGCTTCCAGTCTGTCAAGTCCATCTCTAATTCAGGCAA
GGCCAGGCCCCAGCCCGGCTCCTTCAACAAGCAAGATTCAAAAGCTGACGTCTCCCAGAAGGCGGACCTG
GAAGAGGAGCCCCTACTTCACAACAGCAAGCTGGACAAAGTTCCTGGGGTACAAGGGCAGGCCAGAAAGG
AGAAAGCAGAGGCCTCTAATGCAGGAGCTGCCTGTATGGGGAACAGCCAGCACCAGGGCAGGCAGATGGG
GGCGGGGGCACACCCCCCAATGATCCTGCCCCTTCCCCTGCGAAAGCCCACCACACTTAGGCAGTGCGAA
GTGCTCATCCGCGAGCTGTGGAATACCAACCTCCTGCAGACCCAAGAGCTGCGGCACCTCAAGTCCCTCC
TGGAAGGGAGCCAGAGGCCCCAGGCAGCCCCGGAGGAAGCTAGCTTTCCCAGGGACCAAGAAGCCACGCA
TTTCCCCAAGGTCTCCACCAAGAGCCTCTCCAAGAAATGCCTGAGCCCACCTGTGGCGGAGCGTGCCATC
CTGCCCGCACTGAAGCAGACCCCGAAGAACAACTTTGCCGAGAGGCAGAAGAGGCTGCAGGCAATGCAGA
AACGGCGCCTGCATCGCTCAGTGCTTTGA

Translation (312 aa):
MSGAGVAAGTRPPSSPTPGSRRRRQRPSVGVQSLRPQSPQLRQSDPQKRNLDLEKSLQFLQQQHSEMLAK
LHEEIEHLKRENKDLHYKLIMNQTSQKKDSLSMSSFQSVKSISNSGKARPQPGSFNKQDSKADVSQKADL
EEEPLLHNSKLDKVPGVQGQARKEKAEASNAGAACMGNSQHQGRQMGAGAHPPMILPLPLRKPTTLRQCE
VLIRELWNTNLLQTQELRHLKSLLEGSQRPQAAPEEASFPRDQEATHFPKVSTKSLSKKCLSPPVAERAI
LPALKQTPKNNFAERQKRLQAMQKRRLHRSVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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