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Report for CCDS2277.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2277.1 Public Homo sapiens 2 OSBPL6 24 110 108 CCDS HistoryNCBI Gene:114880Re-query CCDS DB by CCDS ID:2277.1Re-query CCDS DB by GeneID:114880See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2277.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000190611.9 ENSP00000190611.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000190611.9Link to Ensembl Protein Viewer:ENSP00000190611.4Re-query CCDS DB by Nucleotide ID:ENST00000190611Re-query CCDS DB by Protein ID:ENSP00000190611
Original member Current member NCBI NM_032523.4 NP_115912.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032523.4Link to Protein Sequence:NP_115912.1Re-query CCDS DB by Nucleotide ID:NM_032523Re-query CCDS DB by Protein ID:NP_115912Link to BLAST:NP_115912.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115912.1 934 Q9BZF3-1 934 100% 0 0

Chromosomal Locations for CCDS 2277.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 178306185 178306286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178324177 178324269 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178328256 178328378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178331552 178331605 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178332641 178332754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178332871 178333041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178336301 178336433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178338991 178339094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178339672 178339764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178349224 178349389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178361682 178361815 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178372126 178372233 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178373890 178374027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178382420 178382507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178383024 178383277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178384039 178384176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178385458 178385521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178387061 178387139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178389009 178389153 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178391073 178391217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178392412 178392538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178394313 178394435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 178395451 178395559 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2805 nt):
ATGAGTTCAGATGAGAAGGGCATTTCCCCTGCTCATAAAACATCCACTCCAACCCATAGAAGTGCCTCCT
CTTCAACATCCTCCCAAAGGGACAGTAGGCAGAGTATTCACATACTGGAGAGGACTGCTTCCTCTAGCAC
CGAGCCCTCTGTAAGTCGGCAATTGCTAGAACCGGAGCCAGTCCCCCTCTCCAAGGAAGCTGACAGCTGG
GAAATTATAGAAGGGCTGAAAATAGGCCAAACCAATGTCCAGAAACCAGACAAACATGAGGGCTTTATGC
TGAAGAAAAGAAAATGGCCTTTAAAAGGCTGGCACAAGCGTTTTTTTGTCCTGGATAATGGAATGTTAAA
GTATTCAAAGGCACCACTCGATATTCAGAAAGGAAAGGTCCATGGGAGCATAGATGTGGGACTCTCAGTC
ATGTCAATTAAAAAGAAAGCTCGAAGAATAGACCTTGACACCGAAGAGCACATCTATCATTTGAAGGTGA
AATCCCAGGACTGGTTTGATGCATGGGTCTCCAAACTGCGACATCATCGGTTGTATCGTCAGAATGAAAT
TGTGAGATCACCAAGAGATGCTAGTTTTCACATATTTCCTTCAACGTCCACAGCTGAATCCTCACCAGCT
GCTAATGTTTCTGTAATGGATGGAAAGATGCAACCAAACAGCTTTCCGTGGCAGTCCCCTTTACCATGCA
GCAATAGCCTCCCTGCAACGTGCACAACTGGCCAGAGTAAAGTGGCAGCCTGGTTACAGGACTCGGAAGA
GATGGACAGGTGTGCAGAAGATCTTGCACATTGCCAGTCAAACCTTGTGGAACTTAGCAAACTCCTGCAA
AATTTGGAAATACTTCAGAGAACTCAGTCGGCACCTAACTTTACTGACATGCAGGCTAACTGTGTAGATA
TTTCAAAGAAAGACAAGCGGGTCACAAGACGATGGAGAACAAAAAGTGTCAGCAAAGATACAAAAATACA
ACTGCAGGTTCCTTTCAGTGCTACCATGTCACCAGTTCGCTTGCATTCCTCCAACCCCAACCTTTGTGCA
GATATTGAATTTCAGACTCCCCCTAGCCACCTCACTGACCCTCTGGAAAGTTCAACAGATTATACAAAGC
TGCAAGAAGAATTTTGTCTAATCGCACAGAAAGTGCATTCTCTTTTGAAGTCTGCATTTAATAGCATAGC
TATAGAGAAGGAGAAGCTGAAGCAGATGGTTTCCGAGCAGGATCACAGTAAAGGCCACAGCACGCAGATG
GCACGGCTCCGACAGTCACTGTCTCAGGCACTCAACCAGAATGCTGAACTAAGGAGTCGGTTGAACAGAA
TACATTCAGAGTCTATTATTTGTGATCAGGTTGTCAGTGTAAATATTATTCCTAGCCCTGATGAGGCTGG
TGAGCAAATCCATGTCAGTCTCCCCTTATCACAGCAAGTAGCCAATGAGAGCCGCCTCTCCATGTCAGAG
TCTGTTTCTGAGTTCTTTGATGCCCAAGAGGTGCTCCTCTCTGCAAGTTCGTCAGAGAATGAGGCTTCAG
ATGATGAGTCTTACATCAGTGATGTGAGTGATAATATATCTGAAGACAACACCAGTGTTGCAGACAATAT
TTCTCGGCAAATCCTGAATGGGGAGCTTACAGGAGGGGCCTTCCGAAATGGGCGTCGAGCATGCCTGCCA
GCTCCTTGTCCTGACACCAGTAACATTAACCTGTGGAATATCTTGAGGAACAACATTGGTAAAGACCTGT
CTAAAGTCTCTATGCCTGTGGAGCTAAACGAGCCGCTCAACACCCTGCAGCACCTCTGTGAGGAAATGGA
ATACAGCGAGCTCCTGGACAAGGCTTCGGAAACTGATGATCCATATGAGCGCATGGTTCTCGTTGCCGCA
TTTGCAGTTTCAGGATACTGCTCCACCTATTTCAGAGCAGGAAGTAAGCCATTCAACCCAGTCCTTGGGG
AGACTTATGAATGCATTAGAGAAGACAAGGGATTCCGCTTTTTCTCAGAACAGGTTAGCCATCATCCACC
CATTTCTGCCTGTCACTGTGAATCAAAGAATTTTGTGTTTTGGCAAGATATCAGATGGAAAAACAAGTTC
TGGGGGAAGTCGATGGAAATCCTGCCTGTTGGAACACTGAATGTCATGCTTCCAAAGTATGGAGATTACT
ATGTGTGGAATAAAGTCACCACTTGCATACACAACATCCTCAGTGGGAGAAGATGGATAGAACATTATGG
AGAAGTAACCATCAGAAATACCAAAAGCAGTGTTTGCATTTGCAAACTCACATTTGTCAAGGTGAATTAT
TGGAATTCTAACATGAATGAAGTCCAGGGGGTGGTGATAGATCAGGAGGGGAAGGCGGTGTACCGGCTGT
TTGGAAAGTGGCATGAAGGACTCTACTGTGGTGTGGCCCCCTCTGCAAAGTGCATTTGGAGACCAGGTTC
CATGCCAACAAACTATGAGCTGTACTATGGCTTCACAAGGTTTGCTATTGAGCTCAATGAGTTAGATCCA
GTACTAAAAGATCTCCTTCCACCAACAGACGCCCGGTTCCGGCCAGATCAAAGATTTTTGGAAGAAGGAA
ATTTAGAAGCTGCAGCATCAGAGAAGCAAAGAGTAGAGGAACTCCAGAGATCTCGGAGACGATATATGGA
AGAAAACAATCTTGAACATATACCAAAATTTTTTAAAAAAGTTATTGATGCCAATCAAAGAGAAGCCTGG
GTTTCTAACGACACCTACTGGGAGCTTCGAAAGGACCCTGGGTTTAGCAAAGTAGACAGCCCTGTTCTTT
GGTAG

Translation (934 aa):
MSSDEKGISPAHKTSTPTHRSASSSTSSQRDSRQSIHILERTASSSTEPSVSRQLLEPEPVPLSKEADSW
EIIEGLKIGQTNVQKPDKHEGFMLKKRKWPLKGWHKRFFVLDNGMLKYSKAPLDIQKGKVHGSIDVGLSV
MSIKKKARRIDLDTEEHIYHLKVKSQDWFDAWVSKLRHHRLYRQNEIVRSPRDASFHIFPSTSTAESSPA
ANVSVMDGKMQPNSFPWQSPLPCSNSLPATCTTGQSKVAAWLQDSEEMDRCAEDLAHCQSNLVELSKLLQ
NLEILQRTQSAPNFTDMQANCVDISKKDKRVTRRWRTKSVSKDTKIQLQVPFSATMSPVRLHSSNPNLCA
DIEFQTPPSHLTDPLESSTDYTKLQEEFCLIAQKVHSLLKSAFNSIAIEKEKLKQMVSEQDHSKGHSTQM
ARLRQSLSQALNQNAELRSRLNRIHSESIICDQVVSVNIIPSPDEAGEQIHVSLPLSQQVANESRLSMSE
SVSEFFDAQEVLLSASSSENEASDDESYISDVSDNISEDNTSVADNISRQILNGELTGGAFRNGRRACLP
APCPDTSNINLWNILRNNIGKDLSKVSMPVELNEPLNTLQHLCEEMEYSELLDKASETDDPYERMVLVAA
FAVSGYCSTYFRAGSKPFNPVLGETYECIREDKGFRFFSEQVSHHPPISACHCESKNFVFWQDIRWKNKF
WGKSMEILPVGTLNVMLPKYGDYYVWNKVTTCIHNILSGRRWIEHYGEVTIRNTKSSVCICKLTFVKVNY
WNSNMNEVQGVVIDQEGKAVYRLFGKWHEGLYCGVAPSAKCIWRPGSMPTNYELYYGFTRFAIELNELDP
VLKDLLPPTDARFRPDQRFLEEGNLEAAASEKQRVEELQRSRRRYMEENNLEHIPKFFKKVIDANQREAW
VSNDTYWELRKDPGFSKVDSPVLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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