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Report for CCDS2356.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2356.1 Public Homo sapiens 2 WDR12 24 110 108 CCDS HistoryNCBI Gene:55759Re-query CCDS DB by CCDS ID:2356.1Re-query CCDS DB by GeneID:55759See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2356.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000261015.5 ENSP00000261015.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000261015.5Link to Ensembl Protein Viewer:ENSP00000261015.4Re-query CCDS DB by Nucleotide ID:ENST00000261015Re-query CCDS DB by Protein ID:ENSP00000261015
Original member Current member EBI ENST00000688520.1 ENSP00000509107.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000688520.1Link to Ensembl Protein Viewer:ENSP00000509107.1Re-query CCDS DB by Nucleotide ID:ENST00000688520Re-query CCDS DB by Protein ID:ENSP00000509107
Original member Current member NCBI NM_018256.4 NP_060726.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018256.4Link to Protein Sequence:NP_060726.3Re-query CCDS DB by Nucleotide ID:NM_018256Re-query CCDS DB by Protein ID:NP_060726Link to BLAST:NP_060726.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060726.3 423 Q9GZL7 423 100% 0 0

Chromosomal Locations for CCDS 2356.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 202880860 202880937 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202882711 202882783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202883609 202883741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202884198 202884303 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202884395 202884535 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202892617 202892702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202894581 202894626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202896065 202896219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202897300 202897415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202899531 202899637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202901025 202901119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202907865 202907959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 202911436 202911476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1272 nt):
ATGGCTCAGCTCCAAACACGCTTCTACACTGATAACAAGAAATATGCCGTAGATGATGTTCCCTTCTCAA
TCCCTGCTGCCTCTGAAATTGCCGACCTTAGTAACATCATCAATAAACTACTAAAGGACAAAAATGAGTT
CCACAAACATGTGGAGTTTGATTTCCTTATTAAGGGCCAGTTTCTGCGAATGCCCTTGGACAAACACATG
GAAATGGAGAACATCTCATCAGAAGAAGTTGTGGAAATAGAATACGTGGAGAAGTATACTGCACCCCAGC
CAGAGCAATGCATGTTCCATGATGACTGGATCAGTTCAATTAAAGGGGCAGAGGAATGGATCTTGACTGG
TTCTTATGATAAGACTTCTCGGATCTGGTCCTTGGAAGGAAAGTCAATAATGACAATTGTGGGACATACG
GATGTTGTAAAAGATGTGGCCTGGGTGAAAAAAGATAGTTTGTCCTGCTTATTATTGAGTGCTTCTATGG
ATCAGACTATTCTCTTATGGGAGTGGAATGTAGAGAGAAACAAAGTGAAAGCCCTACACTGCTGTAGAGG
TCATGCTGGAAGTGTAGATTCTATAGCTGTTGATGGCTCAGGAACTAAATTTTGCAGTGGCTCCTGGGAT
AAGATGCTAAAGATCTGGTCTACAGTCCCTACAGATGAAGAAGATGAAATGGAGGAGTCCACAAATCGAC
CAAGAAAGAAACAGAAGACAGAACAGTTGGGACTAACAAGGACTCCCATAGTGACCCTCTCTGGCCACAT
GGAGGCAGTTTCCTCAGTTCTGTGGTCAGATGCTGAAGAAATCTGCAGTGCATCTTGGGACCATACAATT
AGAGTGTGGGATGTTGAGTCTGGCAGTCTTAAGTCAACTTTGACAGGAAATAAAGTGTTTAATTGTATTT
CCTATTCTCCACTTTGTAAACGTTTAGCATCTGGAAGCACAGATAGGCATATCAGACTGTGGGATCCCCG
AACTAAAGATGGTTCTTTGGTGTCGCTGTCCCTAACGTCACATACTGGTTGGGTGACATCAGTAAAATGG
TCTCCTACCCATGAACAGCAGCTGATTTCAGGATCTTTAGATAACATTGTTAAGCTGTGGGATACAAGAA
GTTGTAAGGCTCCTCTCTATGATCTGGCTGCTCATGAAGACAAAGTTCTGAGTGTAGACTGGACAGACAC
AGGGCTACTTCTGAGTGGAGGAGCAGACAATAAATTGTATTCCTACAGATATTCACCTACCACTTCCCAT
GTTGGGGCATGA

Translation (423 aa):
MAQLQTRFYTDNKKYAVDDVPFSIPAASEIADLSNIINKLLKDKNEFHKHVEFDFLIKGQFLRMPLDKHM
EMENISSEEVVEIEYVEKYTAPQPEQCMFHDDWISSIKGAEEWILTGSYDKTSRIWSLEGKSIMTIVGHT
DVVKDVAWVKKDSLSCLLLSASMDQTILLWEWNVERNKVKALHCCRGHAGSVDSIAVDGSGTKFCSGSWD
KMLKIWSTVPTDEEDEMEESTNRPRKKQKTEQLGLTRTPIVTLSGHMEAVSSVLWSDAEEICSASWDHTI
RVWDVESGSLKSTLTGNKVFNCISYSPLCKRLASGSTDRHIRLWDPRTKDGSLVSLSLTSHTGWVTSVKW
SPTHEQQLISGSLDNIVKLWDTRSCKAPLYDLAAHEDKVLSVDWTDTGLLLSGGADNKLYSYRYSPTTSH
VGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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