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Report for CCDS54457.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
54457.1 Public Homo sapiens 20 AHCY 24 110 108 CCDS HistoryNCBI Gene:191Re-query CCDS DB by CCDS ID:54457.1Re-query CCDS DB by GeneID:191See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 54457.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000538132.1 ENSP00000442820.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000538132.1Link to Ensembl Protein Viewer:ENSP00000442820.1Re-query CCDS DB by Nucleotide ID:ENST00000538132Re-query CCDS DB by Protein ID:ENSP00000442820
Original member Current member NCBI NM_001161766.2 NP_001155238.1 Accepted alive Link to Nucleotide Sequence:NM_001161766.2Link to Protein Sequence:NP_001155238.1Re-query CCDS DB by Nucleotide ID:NM_001161766Re-query CCDS DB by Protein ID:NP_001155238Link to BLAST:NP_001155238.1
Original member Current member NCBI NM_001322084.2 NP_001309013.1 Accepted alive Link to Nucleotide Sequence:NM_001322084.2Link to Protein Sequence:NP_001309013.1Re-query CCDS DB by Nucleotide ID:NM_001322084Re-query CCDS DB by Protein ID:NP_001309013Link to BLAST:NP_001309013.1
Original member Current member NCBI NM_001322085.2 NP_001309014.1 Accepted alive Link to Nucleotide Sequence:NM_001322085.2Link to Protein Sequence:NP_001309014.1Re-query CCDS DB by Nucleotide ID:NM_001322085Re-query CCDS DB by Protein ID:NP_001309014Link to BLAST:NP_001309014.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155238.1 404 P23526-2 404 100% 0 0
NP_001309013.1 404 P23526-2 404 100% 0 0
NP_001309014.1 404 P23526-2 404 100% 0 0

Chromosomal Locations for CCDS 54457.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 34281034 34281165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34285440 34285634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290332 34290449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290551 34290638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34290731 34290938 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34291419 34291531 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34292358 34292507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34294081 34294156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 34295395 34295529 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGCCGGGCCTGATGCGTATGCGGGAGCGGTACTCGGCCTCCAAGCCACTGAAGGGCGCCCGCATCGCTG
GCTGCCTGCACATGACCGTGGAGACGGCCGTCCTCATTGAGACCCTCGTCACCCTGGGTGCTGAGGTGCA
GTGGTCCAGCTGCAACATCTTCTCCACCCAGGACCATGCGGCGGCTGCCATTGCCAAGGCTGGCATTCCG
GTGTATGCCTGGAAGGGCGAAACGGACGAGGAGTACCTGTGGTGCATTGAGCAGACCCTGTACTTCAAGG
ACGGGCCCCTCAACATGATTCTGGACGACGGGGGCGACCTCACCAACCTCATCCACACCAAGTACCCGCA
GCTTCTGCCAGGCATCCGAGGCATCTCTGAGGAGACCACGACTGGGGTCCACAACCTCTACAAGATGATG
GCCAATGGGATCCTCAAGGTGCCTGCCATCAATGTCAATGACTCCGTCACCAAGAGCAAGTTTGACAACC
TCTATGGCTGCCGGGAGTCCCTCATAGATGGCATCAAGCGGGCCACAGATGTGATGATTGCCGGCAAGGT
AGCGGTGGTAGCAGGCTATGGTGATGTGGGCAAGGGCTGTGCCCAGGCCCTGCGGGGTTTCGGAGCCCGC
GTCATCATCACCGAGATTGACCCCATCAACGCACTGCAGGCTGCCATGGAGGGCTATGAGGTGACCACCA
TGGATGAGGCCTGTCAGGAGGGCAACATCTTTGTCACCACCACAGGCTGTATTGACATCATCCTTGGCCG
GCACTTTGAGCAGATGAAGGATGATGCCATTGTGTGTAACATTGGACACTTTGACGTGGAGATCGATGTC
AAGTGGCTCAACGAGAACGCCGTGGAGAAGGTGAACATCAAGCCGCAGGTGGACCGGTATCGGTTGAAGA
ATGGGCGCCGCATCATCCTGCTGGCCGAGGGTCGGCTGGTCAACCTGGGTTGTGCCATGGGCCACCCCAG
CTTCGTGATGAGTAACTCCTTCACCAACCAGGTGATGGCGCAGATCGAGCTGTGGACCCATCCAGACAAG
TACCCCGTTGGGGTTCATTTCCTGCCCAAGAAGCTGGATGAGGCAGTGGCTGAAGCCCACCTGGGCAAGC
TGAATGTGAAGTTGACCAAGCTAACTGAGAAGCAAGCCCAGTACCTGGGCATGTCCTGTGATGGCCCCTT
CAAGCCGGATCACTACCGCTACTGA

Translation (404 aa):
MPGLMRMRERYSASKPLKGARIAGCLHMTVETAVLIETLVTLGAEVQWSSCNIFSTQDHAAAAIAKAGIP
VYAWKGETDEEYLWCIEQTLYFKDGPLNMILDDGGDLTNLIHTKYPQLLPGIRGISEETTTGVHNLYKMM
ANGILKVPAINVNDSVTKSKFDNLYGCRESLIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGAR
VIITEIDPINALQAAMEGYEVTTMDEACQEGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHFDVEIDV
KWLNENAVEKVNIKPQVDRYRLKNGRRIILLAEGRLVNLGCAMGHPSFVMSNSFTNQVMAQIELWTHPDK
YPVGVHFLPKKLDEAVAEAHLGKLNVKLTKLTEKQAQYLGMSCDGPFKPDHYRY


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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