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Report for CCDS68392.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
68392.1 Public Homo sapiens 3 MYRIP 24 110 108 CCDS HistoryNCBI Gene:25924Re-query CCDS DB by CCDS ID:68392.1Re-query CCDS DB by GeneID:25924See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 68392.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539167.2 ENSP00000438297.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000539167.2Link to Ensembl Protein Viewer:ENSP00000438297.1Re-query CCDS DB by Nucleotide ID:ENST00000539167Re-query CCDS DB by Protein ID:ENSP00000438297
Original member Current member NCBI NM_001284426.2 NP_001271355.1 Accepted alive Link to Nucleotide Sequence:NM_001284426.2Link to Protein Sequence:NP_001271355.1Re-query CCDS DB by Nucleotide ID:NM_001284426Re-query CCDS DB by Protein ID:NP_001271355Link to BLAST:NP_001271355.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001271355.1 672 Q8NFW9-4 672 100% 0 0

Chromosomal Locations for CCDS 68392.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 40166857 40166943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40167159 40167239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40169950 40170093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40182220 40182373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40189826 40190463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40209854 40210093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40233859 40234053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40244446 40244607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40250222 40250326 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40250439 40250499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40251881 40251999 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 40258134 40258166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2019 nt):
ATGGACACCTTGGCTGTGGCCCTACGGGTGGCTGAAGAGGCCATTGAGGAAGCAATTTCCAAAGCAGAGG
CATATGGGGACAGCCTGGACAAGCAAAATGAGGCCAGTTACCTGCGGGACCACAAGGAGGAGCTAACTGA
GGAACTGGCCACGACAATCCTGCAGAAGATTATACGAAAACAGAAGAGCAAAAGTGAGCAGCAAGTGGAA
GAAGAGCCAGGATGGCCACATCCCCAGAGTTGCAGCACAAAGGTGGCAGATGAGGGGACCTCAGCATCCC
CTGGAGGCTACCGTGCTCCCGCTGCCCTCTGGAGGTCCCAGTCTGCCTTCTCAATCACTGGAGAAGAAGC
CCTGAAGACCCCTCCAGTGGAGGCTCCATCGAGGCAGCCAAGGGACCAAGGCCAACACCCGAGAGCAGAG
TCTGCTCTGCCCAGCTGGAAGAGTGTGGACAGGCTGGATGAAACAAACCTGGCCCCAGTTTTGCAGAGCC
CCGACGGGAACTGGGTGGCCCTGAAGGATGGCGCTCCACCCCCCACCCGACTACTGGCCAAACCTAAGAG
CGGGACGTTTCAGGCCCTGGAGGTGGCCTCCAGTGTGGCATCTGCCTACGATGAGATGGGCTCCGATAGC
GAGGAAGACTTTGACTGGAGTGAGGCCTTGAGCAAGCTGTGTCCCAGGTCCCGGGCCCTGCCCAGGAACC
CCCAGCCTCAGCCCACACAGGCCCAGAGCTCTGACCAAGGCCCCATAGCTGCCTCCCCATCCTCTGCACT
CTCCCCCAACCCTGAGGCCATGTGCTCTGACTCGGAGACCTCCTCCGCAGGCTCTTCCCGAGAAGTTGGG
CACCAGGCCAGACTGTCCTGGTTGCAGAGGAAGGCCCCCAGGAACCCTGCAGCTGAGAAGATGCGCTTGC
ATGGAGAGCTGGACGTGAACTTCAACCCCCAGTTGGCCAGCAGGGAGACCTCGGACAGCAGCGAGCCGGA
GGAGGCCCCCCACACCACAGACCGGCGGGCCAGGAGGTGGAGAAGAGCCCGACTGGGCTCAGAAGAGCCA
AGCAAAGAACCATCTTCCCCCAGCGCCCAGCTCCGGGATCTAGACACACATCAGGTGTCGGATGATTTAT
CAGAGACAGACATCAGCAATGAGGCTCGGGATCCCCAGACTCTCACAGACACCACAGAGGAGAAACGGAG
AAACAGGCTGTACGAGTTAGCAATGAAAATGAGTGAAAAGGAGACTTCTTCAGGGGAGGATCAGGAGTCT
GAGCCCAAGACAGAATCTGAGAACCAGAAGGAAAGTCTGTCCTCTGAAGACAACAGCCAGAGTGTCCAGG
AAGAGCTGAAGAAGAAGTTTTCTGCTGTTTCTCTCTGCAACATCTCCACAGAAGTCCTGAAAGTCATCAA
TGCCACAGAGGAGTTGATAGCAGGATCTACAGGGCCCTGGGAGTCCCCACAAGTCCCTCCTGACAGACAG
AAGGGGATGTTTCCTCGTGGGACAGACCAAGTGAGACTGGATGAGCAGCTGACTTCCCTGGAAGAAAATG
TATACCTGGCAGCAGGCACTGTGTATGGACTGGAGACCCAGCTGACTGAGCTAGAAGATGCCGCCCGCTG
CATCCACAGTGGCACTGATGAGACCCATCTGGCGGATCTGGAGGACCAGGTGGCCACGGCTGCAGCCCAA
GTCCACCATGCTGAACTCCAGATTTCAGATATTGAGAGCCGGATTTCAGCCCTGACCATTGCAGGATTAA
ACATAGCACCATGTGTGCGCTTCACAAGAAGACGGGATCAGAAGCAAAGGACCCAGGTACAAACCATAGA
TACATCAAGGCAGCAAAGGAGGAAACTGCCTGCTCCACCGGTGAAAGCTGAAAAAATTGAGACATCTTCA
GTGACTACCATTAAAACATTTAACCACAACTTCATTCTCCAAGGCTCCTCAACAAACAGGACTAAGGAAA
GGAAAGGCACCACCAAGGATTTGATGGAGCCTGCTCTGGAGTCAGCTGTGATGTACTGA

Translation (672 aa):
MDTLAVALRVAEEAIEEAISKAEAYGDSLDKQNEASYLRDHKEELTEELATTILQKIIRKQKSKSEQQVE
EEPGWPHPQSCSTKVADEGTSASPGGYRAPAALWRSQSAFSITGEEALKTPPVEAPSRQPRDQGQHPRAE
SALPSWKSVDRLDETNLAPVLQSPDGNWVALKDGAPPPTRLLAKPKSGTFQALEVASSVASAYDEMGSDS
EEDFDWSEALSKLCPRSRALPRNPQPQPTQAQSSDQGPIAASPSSALSPNPEAMCSDSETSSAGSSREVG
HQARLSWLQRKAPRNPAAEKMRLHGELDVNFNPQLASRETSDSSEPEEAPHTTDRRARRWRRARLGSEEP
SKEPSSPSAQLRDLDTHQVSDDLSETDISNEARDPQTLTDTTEEKRRNRLYELAMKMSEKETSSGEDQES
EPKTESENQKESLSSEDNSQSVQEELKKKFSAVSLCNISTEVLKVINATEELIAGSTGPWESPQVPPDRQ
KGMFPRGTDQVRLDEQLTSLEENVYLAAGTVYGLETQLTELEDAARCIHSGTDETHLADLEDQVATAAAQ
VHHAELQISDIESRISALTIAGLNIAPCVRFTRRRDQKQRTQVQTIDTSRQQRRKLPAPPVKAEKIETSS
VTTIKTFNHNFILQGSSTNRTKERKGTTKDLMEPALESAVMY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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