NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS93358.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93358.1 Public Homo sapiens 3 CCDC14 24 110 108 CCDS HistoryNCBI Gene:64770Re-query CCDS DB by CCDS ID:93358.1Re-query CCDS DB by GeneID:64770See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93358.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409697.8 ENSP00000386866.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409697.8Link to Ensembl Protein Viewer:ENSP00000386866.4Re-query CCDS DB by Nucleotide ID:ENST00000409697Re-query CCDS DB by Protein ID:ENSP00000386866
Original member Current member NCBI NM_001366335.1 NP_001353264.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001366335.1Link to Protein Sequence:NP_001353264.1Re-query CCDS DB by Nucleotide ID:NM_001366335Re-query CCDS DB by Protein ID:NP_001353264Link to BLAST:NP_001353264.1

Chromosomal Locations for CCDS 93358.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 123914779 123915718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123931102 123931234 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123931308 123931526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123933673 123933755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123944849 123944990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123946803 123947319 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123948691 123948785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123948896 123949132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123955843 123955965 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123956046 123956115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123956355 123956427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123956740 123956795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 123961144 123961173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2718 nt):
ATGGTCAGGTCTGGAGCTCGACCGGGCCAGGTGTTATCTTCAGGAAGGCACACTGGACCTGCTAAATTAA
CAAATGGAAAGAAAGCGACCTATTTAAGAAAAATACCACGTTTTAATGCAGATTCTGGCTATTCCATCCA
TTCTGATTCAGAAAGTCAGGCTGAAACTGTACACGGGCTTGATGGTTGTGCTTCTTTGCTGAGGGACATT
TTGAGAAATGAAGATTCAGGTTCAGAAACAGCATATTTAGAAAACAGATCTAATTCTAGACCTTTAGAAA
GCAAAAGATACGGATCAAAAAAGAAAAGACATGAAAAACATACTATTCCTTTGGTAGTCCAGAAAGAAAC
ATCATCTTCAGATAATAAGAAACAGATACCTAATGAAGCTTCTGCTAGAAGTGAAAGAGACACATCAGAC
CTAGAGCAAAACTGGTCATTGCAAGATCATTATAGAATGTATTCACCCATAATATACCAAGCCCTCTGTG
AGCACGTGCAGACTCAGATGTCACTGATGAATGACTTGACTTCAAAGAACATCCCTAATGGAATTCCTGC
TGTACCATGCCATGCTCCCTCTCATTCTGAATCTCAGGCAACTCCTCATTCTAGTTATGGCTTATGTACC
TCCACCCCAGTCTGGTCACTTCAGCGGCCACCCTGCCCTCCAAAGGTTCATTCTGAAGTTCAAACTGATG
GCAACAGTCAGTTTGCATCACAAGGTAAAACAGTTTCTGCAACCTGTACTGATGTTCTACGGAATTCATT
TAATACCAGTCCTGGAGTTCCATGTAGCCTGCCCAAAACTGACATATCAGCTATTCCAACATTGCAGCAA
CTGGGCCTTGTTAATGGAATTCTGCCACAACAAGGAATTCATAAGGAAACAGACCTACTAAAATGTATTC
AAACATATTTGTCTCTTTTTCGATCTCATGGAAAAGAAACGCATCTGGACAGTCAGACACACCGAAGCCC
TACTCAGTCACAACCAGCTTTCTTGGCCACTAATGAAGAAAAATGTGCCAGAGAGCAAATTAGAGAGGCC
ACAAGTGAAAGAAAGGATTTAAACATACATGTGCGAGATACAAAAACAGTGAAGGATGTACAGAAGGCAA
AAAATGTGAACAAGACAGCTGAAAAAGTTAGAATTATAAAATATTTGTTGGGAGAGCTCAAGGCCCTGGT
AGCAGAACAAGAGGATTCAGAAATTCAGAGGTTGATTACAGAAATGGAGGCATGTATATCTGTACTTCCA
ACAGTAAGTGGAAACACAGATATTCAAGTTGAGATAGCACTGGCCATGCAACCATTAAGAAGTGAGAATG
CTCAGTTACGAAGGCAGTTGAGAATTTTGAACCAGCAACTCAGAGAACAACAGAAAACTCAAAAACCATC
TGGTGCTGTGGATTGCAACCTTGAATTGTTTTCTCTTCAGTCATTGAATATGTCACTGCAAAATCAATTG
GAGGAGTCACTAAAGAGCCAGGAATTACTGCAGAGTAAAAATGAAGAGCTGTTAAAAGTGATTGAAAATC
AGAAAGATGAAAACAAAAAATTTAGTAGTATATTTAAAGACAAAGATCAAACTATACTTGAAAATAAACA
GCAATATGATATTGAGATAACAAGAATAAAAATTGAATTGGAGGAAGCCCTAGTCAATGTGAAAAGCTCC
CAGTTTAAGTTAGAAACTGCTGAAAAGGAAAACCAGATATTGGGGATAACATTACGTCAGCGTGATGCTG
AGGTGACTCGACTAAGAGAATTAACCAGAACTTTACAGACTAGCATGGCAAAGCTTCTCTCCGATCTTAG
TGTGGACAGTGCTCGCTGCAAGCCTGGGAATAACCTTACCAAATCACTCTTGAACATTCATGATAAACAA
CTTCAACATGACCCAGCTCCTGCTCACACTTCCATAATGAGCTATCTAAATAAGTTAGAAACAAATTACA
GTTTTACACATTCAGAGCCACTTTCTACAATTAAAAATGAGGAAACCATAGAGCCAGACAAAACCTATGA
AAATGTTCTGTCCTCCAGAGGCCCTCAAAATAGTAACACTAGGGGCATGGAGGAAGCATCTGCACCTGGA
ATTATTTCTGCCCTTTCAAAACAGGATTCTGATGAAGGGAGTGAAACTATGGCTTTAATAGAAGATGAGC
ATAATTTGGATAATACAATTTACATTCCTTTTGCTAGAAGCACTCCTGAAAAGAAATCACCACTTTCTAA
GAGACTATCCCCTCAGCCACAAATAAGAGCAGCTACAACACAGCTAGTCAGCAACAGCGGACTTGCTGTC
TCTGGAAAAGAAAATAAACTGTGTACACCTGTAATCTGTTCCTCTTCAACAAAGGAAGCAGAAGATGCAC
CTGAAAAACTTTCCAGAGCATCTGATATGAAGGACACACAGCTCCTCAAGAAAATAAAGGAAGCAATTGG
TAAGATCCCTGCTGCCACCAAGGAGCCAGAGGAACAAACTGCATGTCATGGCCCATCAGGTTGTCTTAGC
AACAGCCTTCAAGTGAAAGGCAATACTGTCTGTGATGGTAGTGTTTTCACTTCTGACTTGATGTCTGACT
GGAGCATCTCTTCGTTTTCAACGTTCACTTCTCGTGATGAACAAGACTTCAGAAATGGCCTTGCGGCATT
AGATGCCAACATAGCTAGACTCCAGAAGTCTTTAAGGACTGGTCTTCTGGAGAAATGA

Translation (905 aa):
MVRSGARPGQVLSSGRHTGPAKLTNGKKATYLRKIPRFNADSGYSIHSDSESQAETVHGLDGCASLLRDI
LRNEDSGSETAYLENRSNSRPLESKRYGSKKKRHEKHTIPLVVQKETSSSDNKKQIPNEASARSERDTSD
LEQNWSLQDHYRMYSPIIYQALCEHVQTQMSLMNDLTSKNIPNGIPAVPCHAPSHSESQATPHSSYGLCT
STPVWSLQRPPCPPKVHSEVQTDGNSQFASQGKTVSATCTDVLRNSFNTSPGVPCSLPKTDISAIPTLQQ
LGLVNGILPQQGIHKETDLLKCIQTYLSLFRSHGKETHLDSQTHRSPTQSQPAFLATNEEKCAREQIREA
TSERKDLNIHVRDTKTVKDVQKAKNVNKTAEKVRIIKYLLGELKALVAEQEDSEIQRLITEMEACISVLP
TVSGNTDIQVEIALAMQPLRSENAQLRRQLRILNQQLREQQKTQKPSGAVDCNLELFSLQSLNMSLQNQL
EESLKSQELLQSKNEELLKVIENQKDENKKFSSIFKDKDQTILENKQQYDIEITRIKIELEEALVNVKSS
QFKLETAEKENQILGITLRQRDAEVTRLRELTRTLQTSMAKLLSDLSVDSARCKPGNNLTKSLLNIHDKQ
LQHDPAPAHTSIMSYLNKLETNYSFTHSEPLSTIKNEETIEPDKTYENVLSSRGPQNSNTRGMEEASAPG
IISALSKQDSDEGSETMALIEDEHNLDNTIYIPFARSTPEKKSPLSKRLSPQPQIRAATTQLVSNSGLAV
SGKENKLCTPVICSSSTKEAEDAPEKLSRASDMKDTQLLKKIKEAIGKIPAATKEPEEQTACHGPSGCLS
NSLQVKGNTVCDGSVFTSDLMSDWSISSFSTFTSRDEQDFRNGLAALDANIARLQKSLRTGLLEK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH