NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS75024.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75024.1 Public Homo sapiens 3 CEP70 24 110 108 CCDS HistoryNCBI Gene:80321Re-query CCDS DB by CCDS ID:75024.1Re-query CCDS DB by GeneID:80321See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75024.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000489254.5 ENSP00000417821.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000489254.5Link to Ensembl Protein Viewer:ENSP00000417821.1Re-query CCDS DB by Nucleotide ID:ENST00000489254Re-query CCDS DB by Protein ID:ENSP00000417821
Original member Current member NCBI NM_001288967.2 NP_001275896.1 Accepted alive Link to Nucleotide Sequence:NM_001288967.2Link to Protein Sequence:NP_001275896.1Re-query CCDS DB by Nucleotide ID:NM_001288967Re-query CCDS DB by Protein ID:NP_001275896Link to BLAST:NP_001275896.1

Chromosomal Locations for CCDS 75024.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 138495015 138495076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138498031 138498110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138500110 138500224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138500399 138500567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138500735 138500881 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138505295 138505465 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138508439 138508544 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138525490 138525564 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138529199 138529287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138529375 138529462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138532514 138532570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138537178 138537347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 138591854 138591862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1338 nt):
ATGACTGAGGTGAAGTGCCAGCATTATAAGAAAAAACGAACGGAGCAAGAAGAAACTATTGCTTCTTTGC
AAATGGAAGTCTGTAGATTAAAAAAGGAGGAAGAAGATCGCATTGTCACTCAAAACAGAGTGTTTGCCTA
TCTGTGCAAAAGAGTTCCTCATACCGTCTTGGATAGACAGTTGCTTTGTCTAATTGATTACTATGAATCT
AAAATTAGAAAAATTCATACACAAAGGCAATATAAAGAAGATGAAAGTCAGTCAGAAGAAGAAAACGACT
ACAGAAATCTGGATGCCTCACCAACTTATAAAGGCCTTTTAATGTCATTACAGAATCAACTCAAGGAATC
AAAATCTAAGATTGATGCACTTTCAAGTGAAAAGCTGAACCTCCAAAAAGATTTGGAAACCAGGCCTACG
CAGCATGAATTAAGACTTTATAAACAGCAGGTGAAGAAGCTGGAAAAAGCCCTTAAGAAAAACGTCAAAT
TACAGGAGCTTATTAATCATAAGAAGGCTGAGGACACAGAGAAGAAAGATGAGCCCAGCAAATATAATCA
GCAACAGGCCCTAATTGACCAGAGATACTTTCAGGTGCTGTGTAGCATCAATTCAATTATCCACAATCCA
AGAGCTCCAGTAATAATTTATAAACAGACCAAAGGGGGAGTCCAAAATTTTAATAAAGATCTTGTTCAAG
ATTGTGGATTTGAGCATCTTGTTCCTGTAATAGAAATGTGGGCAGATCAACTGACATCCTTAAAGGATTT
GTATAAGTCCTTGAAAACACTATCTGCAGAACTGGTACCTTGGCTTAATTTGAAGAAGCAGGATGAAAAT
GAAGGTATCAAAGTTGAAGATTTGTTGTTTATAGTAGATACTATGCTGGAAGAAGTTGAAAATAAGGAAA
AGGACAGCAATATGCCACACTTTCAAACTTTGCAAGCTATTGTTTCTCACTTCCAAAAGTTATTTGATGT
GCCTTCTTTAAATGGAGTCTATCCCCGAATGAATGAAGTTTATACTAGGCTTGGAGAAATGAACAATGCT
GTGAGAAACCTCCAAGAACTCTTAGAATTAGATAGTTCATCCTCATTGTGTGTGCTAGTAAGCACTGTTG
GAAAACTCTGTAGGCTGATTAATGAAGATGTGAATGAGCAGGTTATGCAGGTATTAGGACCTGAAGACCT
CCAGAGCATTATCTACAAATTGGAAGAACACGAGGAATTTTTCCCAGCATTTCAGGCATTTACTAATGAT
CTACTTGAAATCTTAGAAATTGATGACTTGGATGCCATTGTACCTGCAGTAAAGAAATTAAAAGTACTTT
CATACTGA

Translation (445 aa):
MTEVKCQHYKKKRTEQEETIASLQMEVCRLKKEEEDRIVTQNRVFAYLCKRVPHTVLDRQLLCLIDYYES
KIRKIHTQRQYKEDESQSEEENDYRNLDASPTYKGLLMSLQNQLKESKSKIDALSSEKLNLQKDLETRPT
QHELRLYKQQVKKLEKALKKNVKLQELINHKKAEDTEKKDEPSKYNQQQALIDQRYFQVLCSINSIIHNP
RAPVIIYKQTKGGVQNFNKDLVQDCGFEHLVPVIEMWADQLTSLKDLYKSLKTLSAELVPWLNLKKQDEN
EGIKVEDLLFIVDTMLEEVENKEKDSNMPHFQTLQAIVSHFQKLFDVPSLNGVYPRMNEVYTRLGEMNNA
VRNLQELLELDSSSSLCVLVSTVGKLCRLINEDVNEQVMQVLGPEDLQSIIYKLEEHEEFFPAFQAFTND
LLEILEIDDLDAIVPAVKKLKVLSY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH