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Report for CCDS58661.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58661.1 Public Homo sapiens 19 CCER2 24 110 108 CCDS HistoryNCBI Gene:643669Re-query CCDS DB by CCDS ID:58661.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 58661.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000571838.2 ENSP00000460665.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000571838.2Link to Ensembl Protein Viewer:ENSP00000460665.1Re-query CCDS DB by Nucleotide ID:ENST00000571838Re-query CCDS DB by Protein ID:ENSP00000460665
Original member Current member NCBI NM_001243212.2 NP_001230141.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001243212.2Link to Protein Sequence:NP_001230141.1Re-query CCDS DB by Nucleotide ID:NM_001243212Re-query CCDS DB by Protein ID:NP_001230141Link to BLAST:NP_001230141.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001230141.1 266 I3L3R5 266 100% 0 0

Chromosomal Locations for CCDS 58661.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 38909236 38909325 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38910563 38911083 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38911566 38911653 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38911812 38911852 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 38912098 38912158 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (801 nt):
ATGCCGCCCCGAGGGCCAGCCTCTGAGCTGCTGCTGCTGCGGCTGCTCCTGCTGGGGGCGGCCACCGCTG
CTCCCTTGGCACCGAGACCCTCCAAGGAGGAGCTGACCCGCTGTCTGGCAGAGGTGGTCACAGAGGTGCT
GACCGTGGGCCAGGTCCAGAGAGGACCCTGCACTGCTCTTCTCCACAAGGAGTTGTGCGGGACAGAGCCC
CACGGCTGTGCGTCCACCGAGGAGAAAGGCCTGCTGCTTGGGGATTTCAAGAAGCAGGAGGCTGGGAAGA
TGAGGTCCAGCCAGGAGGTGAGGGATGAGGAAGAGGAGGAGGTAGCAGAGAGGACCCACAAGTCTGAGGT
CCAGGAACAAGCCATCCGCATGCAAGGGCATCGCCAGCTCCACCAGGAGGAGGACGAGGAGGAGGAGAAG
GAGGAGAGGAAGAGGGGGCCCATGGAGACCTTTGAGGACCTGTGGCAGCGGCATCTAGAGAATGGAGGGG
ACCTCCAGAAGCGGGTGGCAGAGAAGGCCAGTGACAAAGAGACGGCCCAGTTCCAGGCAGAGGAGAAGGG
GGTGCGGGTGCTGGGCGGGGACCGCAGCCTGTGGCAGGGGGCCGAGAGAGGCGGAGGAGAGAGGCGCGAG
GACTTGCCCCACCACCACCACCACCACCACCAGCCAGAGGCTGAGCCCAGGCAGGAGAAGGAGGAGGCTT
CGGAGAGGGAGGAAAAGGAGGTGGAGCAGCTGGAGCACTTGAGAGACGAACTGAAGAAGGTGACAGAGAC
GCTGGGGGAGCAGCTCAGGAGGGAGGGCTGA

Translation (266 aa):
MPPRGPASELLLLRLLLLGAATAAPLAPRPSKEELTRCLAEVVTEVLTVGQVQRGPCTALLHKELCGTEP
HGCASTEEKGLLLGDFKKQEAGKMRSSQEVRDEEEEEVAERTHKSEVQEQAIRMQGHRQLHQEEDEEEEK
EERKRGPMETFEDLWQRHLENGGDLQKRVAEKASDKETAQFQAEEKGVRVLGGDRSLWQGAERGGGERRE
DLPHHHHHHHQPEAEPRQEKEEASEREEKEVEQLEHLRDELKKVTETLGEQLRREG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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