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Report for CCDS47235.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47235.1 Public Homo sapiens 5 CERT1 24 110 108 CCDS HistoryNCBI Gene:10087Re-query CCDS DB by CCDS ID:47235.1Re-query CCDS DB by GeneID:10087See the combined annotation on chromosome 5 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47235.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000405807.10 ENSP00000383996.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000405807.10Link to Ensembl Protein Viewer:ENSP00000383996.4Re-query CCDS DB by Nucleotide ID:ENST00000405807Re-query CCDS DB by Protein ID:ENSP00000383996
Original member Current member NCBI NM_001130105.1 NP_001123577.1 Accepted alive Link to Nucleotide Sequence:NM_001130105.1Link to Protein Sequence:NP_001123577.1Re-query CCDS DB by Nucleotide ID:NM_001130105Re-query CCDS DB by Protein ID:NP_001123577Link to BLAST:NP_001123577.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001123577.1 752 Q9Y5P4-3 752 100% 0 0

Chromosomal Locations for CCDS 47235.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 5 (NC_000005.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5See the combined annotation on chromosome 5 in Sequence Viewer

Chromosome Start Stop Links
5 75379346 75379473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75381072 75381201 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75381949 75382077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75384642 75384712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75385902 75386034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75389592 75389687 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75399310 75399387 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75400205 75400297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75402972 75403058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75411011 75411103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75416876 75417033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75419341 75419424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75425361 75425499 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75426371 75426478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75459065 75459181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75505982 75506116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75511112 75511505 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5
5 75511759 75511844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 5Link to Ensembl Genome Browser on chromosome 5

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2259 nt):
ATGCAGCACAGCTGCATCCCTACCCCGCCCTCTCCTTTCTCCGCTCCTCCTGCTTTTCTACCCGTCGTCA
CCCGGGAGAGCCGGAGGGGGCTAAGTTCGGGTGGCAGCGCCGGGCGCAACGCAGGGGTCACGGCGACGGC
GGCGGCGGCTGACGGCTGGAAGGGTAGGCTTCCTTCACCGCTCGTCCTCCTTCCTCGCTCCGCTCGGTGT
CAGGCGCGGCGGCGGCGCGGCGGGCGGACTTCGTCCCTCCTCCTGCTCCCCCCCACACCGGAGCGGGCAC
TCTTCGCTTCGCCATCCCCCGACCCTTCACCCCGAGGACTGGGCGCCTCCTCCGGCGCAGCTGAGGGAGC
GGGGGCCGGTCTCCTGCTCGGTTGTCGAGCCTCCATGTCGGATAATCAGAGCTGGAACTCGTCGGGCTCG
GAGGAGGATCCAGAGACGGAGTCTGGGCCGCCTGTGGAGCGCTGCGGGGTCCTCAGTAAGTGGACAAACT
ACATTCATGGGTGGCAGGATCGTTGGGTAGTTTTGAAAAATAATGCTCTGAGTTACTACAAATCTGAAGA
TGAAACAGAGTATGGCTGCAGAGGATCCATCTGTCTTAGCAAGGCTGTCATCACACCTCACGATTTTGAT
GAATGTCGATTTGATATTAGTGTAAATGATAGTGTTTGGTATCTTCGTGCTCAGGATCCAGATCATAGAC
AGCAATGGATAGATGCCATTGAACAGCACAAGACTGAATCTGGATATGGATCTGAATCCAGCTTGCGTCG
ACATGGCTCAATGGTGTCCCTGGTGTCTGGAGCAAGTGGCTACTCTGCAACATCCACCTCTTCATTCAAG
AAAGGCCACAGTTTACGTGAGAAGTTGGCTGAAATGGAAACATTTAGAGACATCTTATGTAGACAAGTTG
ACACGCTACAGAAGTACTTTGATGCCTGTGCTGATGCTGTCTCTAAGGATGAACTTCAAAGGGATAAAGT
GGTAGAAGATGATGAAGATGACTTTCCTACAACGCGTTCTGATGGTGACTTCTTGCATAGTACCAACGGC
AATAAAGAAAAGTTATTTCCACATGTGACACCAAAAGGAATTAATGGTATAGACTTTAAAGGGGAAGCGA
TAACTTTTAAAGCAACTACTGCTGGAATCCTTGCAACACTTTCTCATTGTATTGAACTAATGGTTAAACG
TGAGGACAGCTGGCAGAAGAGACTGGATAAGGAAACTGAGAAGAAAAGAAGAACAGAGGAAGCATATAAA
AATGCAATGACAGAACTTAAGAAAAAATCCCACTTTGGAGGACCAGATTATGAAGAAGGCCCTAACAGTC
TGATTAATGAAGAAGAGTTCTTTGATGCTGTTGAAGCTGCTCTTGACAGACAAGATAAAATAGAAGAACA
GTCACAGAGTGAAAAGGTGAGATTACATTGGCCTACATCCTTGCCCTCTGGAGATGCCTTTTCTTCTGTG
GGGACACATAGATTTGTCCAAAAGCCCTATAGTCGCTCTTCCTCCATGTCTTCCATTGATCTAGTCAGTG
CCTCTGATGATGTTCACAGATTCAGCTCCCAGGTTGAAGAGATGGTGCAGAACCACATGACTTACTCATT
ACAGGATGTAGGCGGAGATGCCAATTGGCAGTTGGTTGTAGAAGAAGGAGAAATGAAGGTATACAGAAGA
GAAGTAGAAGAAAATGGGATTGTTCTGGATCCTTTAAAAGCTACCCATGCAGTTAAAGGCGTCACAGGAC
ATGAAGTCTGCAATTATTTCTGGAATGTTGACGTTCGCAATGACTGGGAAACAACTATAGAAAACTTTCA
TGTGGTGGAAACATTAGCTGATAATGCAATCATCATTTATCAAACACACAAGAGGGTGTGGCCTGCTTCT
CAGCGAGACGTATTATATCTTTCTGTCATTCGAAAGATACCAGCCTTGACTGAAAATGACCCTGAAACTT
GGATAGTTTGTAATTTTTCTGTGGATCATGACAGTGCTCCTCTAAACAACCGATGTGTCCGTGCCAAAAT
AAATGTTGCTATGATTTGTCAAACCTTGGTAAGCCCACCAGAGGGAAACCAGGAAATTAGCAGGGACAAC
ATTCTATGCAAGATTACATATGTAGCTAATGTGAACCCTGGAGGATGGGCACCAGCCTCAGTGTTAAGGG
CAGTGGCAAAGCGAGAGTATCCTAAATTTCTAAAACGTTTTACTTCTTACGTCCAAGAAAAAACTGCAGG
AAAGCCTATTTTGTTCTAG

Translation (752 aa):
MQHSCIPTPPSPFSAPPAFLPVVTRESRRGLSSGGSAGRNAGVTATAAAADGWKGRLPSPLVLLPRSARC
QARRRRGGRTSSLLLLPPTPERALFASPSPDPSPRGLGASSGAAEGAGAGLLLGCRASMSDNQSWNSSGS
EEDPETESGPPVERCGVLSKWTNYIHGWQDRWVVLKNNALSYYKSEDETEYGCRGSICLSKAVITPHDFD
ECRFDISVNDSVWYLRAQDPDHRQQWIDAIEQHKTESGYGSESSLRRHGSMVSLVSGASGYSATSTSSFK
KGHSLREKLAEMETFRDILCRQVDTLQKYFDACADAVSKDELQRDKVVEDDEDDFPTTRSDGDFLHSTNG
NKEKLFPHVTPKGINGIDFKGEAITFKATTAGILATLSHCIELMVKREDSWQKRLDKETEKKRRTEEAYK
NAMTELKKKSHFGGPDYEEGPNSLINEEEFFDAVEAALDRQDKIEEQSQSEKVRLHWPTSLPSGDAFSSV
GTHRFVQKPYSRSSSMSSIDLVSASDDVHRFSSQVEEMVQNHMTYSLQDVGGDANWQLVVEEGEMKVYRR
EVEENGIVLDPLKATHAVKGVTGHEVCNYFWNVDVRNDWETTIENFHVVETLADNAIIIYQTHKRVWPAS
QRDVLYLSVIRKIPALTENDPETWIVCNFSVDHDSAPLNNRCVRAKINVAMICQTLVSPPEGNQEISRDN
ILCKITYVANVNPGGWAPASVLRAVAKREYPKFLKRFTSYVQEKTAGKPILF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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