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Report for CCDS4514.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4514.1 Public Homo sapiens 6 TMEM14C 24 110 108 CCDS HistoryNCBI Gene:51522Re-query CCDS DB by CCDS ID:4514.1Re-query CCDS DB by GeneID:51522See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4514.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000229563.6 ENSP00000229563.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000229563.6Link to Ensembl Protein Viewer:ENSP00000229563.5Re-query CCDS DB by Nucleotide ID:ENST00000229563Re-query CCDS DB by Protein ID:ENSP00000229563
Original member Current member EBI ENST00000541412.5 ENSP00000444561.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000541412.5Link to Ensembl Protein Viewer:ENSP00000444561.1Re-query CCDS DB by Nucleotide ID:ENST00000541412Re-query CCDS DB by Protein ID:ENSP00000444561
Original member Current member NCBI NM_001165258.2 NP_001158730.1 Accepted alive Link to Nucleotide Sequence:NM_001165258.2Link to Protein Sequence:NP_001158730.1Re-query CCDS DB by Nucleotide ID:NM_001165258Re-query CCDS DB by Protein ID:NP_001158730Link to BLAST:NP_001158730.1
Original member Current member NCBI NM_016462.4 NP_057546.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016462.4Link to Protein Sequence:NP_057546.1Re-query CCDS DB by Nucleotide ID:NM_016462Re-query CCDS DB by Protein ID:NP_057546Link to BLAST:NP_057546.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001158730.1 112 Q9P0S9 112 100% 0 0
NP_057546.1 112 Q9P0S9 112 100% 0 0

Chromosomal Locations for CCDS 4514.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 10724614 10724633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 10724961 10725037 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 10725907 10726008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 10728640 10728727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 10730615 10730666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (339 nt):
ATGCAGGACACTGGCTCAGTAGTGCCTTTGCATTGGTTTGGCTTTGGCTACGCAGCACTGGTTGCTTCTG
GTGGGATCATTGGCTATGTAAAAGCAGGCAGCGTGCCGTCCCTGGCTGCAGGGCTGCTCTTTGGCAGTCT
AGCCGGCCTGGGTGCTTACCAGCTGTCTCAGGATCCAAGGAACGTTTGGGTTTTCCTAGCTACATCTGGT
ACCTTGGCTGGCATTATGGGAATGAGGTTCTACCACTCTGGAAAATTCATGCCTGCAGGTTTAATTGCAG
GTGCCAGTTTGCTGATGGTCGCCAAAGTTGGAGTTAGTATGTTCAACAGACCCCATTAG

Translation (112 aa):
MQDTGSVVPLHWFGFGYAALVASGGIIGYVKAGSVPSLAAGLLFGSLAGLGAYQLSQDPRNVWVFLATSG
TLAGIMGMRFYHSGKFMPAGLIAGASLLMVAKVGVSMFNRPH


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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